RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ZNF182P17025 639 aaPredicted RBP9.37□□□□□ -0.91
SNX1-209ENST00000559961 RPL35AP18077 110 aaKnown RBP9.37□□□□□ -0.91
SNX1-209ENST00000559961 FCGR2BP31994 310 aaPredicted RBP9.37□□□□□ -0.91
SNX1-209ENST00000559961 TFPI2P48307 235 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
SNX1-209ENST00000559961 PIGPP57054 158 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 PMS2P11Q13670 270 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 RNASE12Q5GAN4 147 aaKnown RBP9.37□□□□□ -0.91
SNX1-209ENST00000559961 ZNF114Q8NC26 417 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 EXTL2Q9UBQ6 330 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 IGKV3-7A0A075B6H7 116 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 C3orf85A0A1B0GTC6 90 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 A0A1W2PS18 150 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 MPTX1A8MV57 137 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 ADMP35318 185 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 MFAP2P55001 183 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 TAS2R19P59542 299 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 RND3P61587 244 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 DEFB135Q30KP9 77 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
SNX1-209ENST00000559961 LYG2Q86SG7 212 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 RNF2Q99496 336 aa9.36□□□□□ -0.91
SNX1-209ENST00000559961 NXF2Q9GZY0 626 aaKnown RBP9.36□□□□□ -0.91
SNX1-209ENST00000559961 C14orf166Q9Y224 244 aaKnown RBP9.36□□□□□ -0.91
SNX1-209ENST00000559961 A0A0J9YWU9 116 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 DBX1A6NMT0 343 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 I3L2K1 104 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 CHEK1O14757 476 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 RGS5O15539 181 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 ST8SIA3O43173 380 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 TNFRSF9Q07011 255 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 TERB2Q8NHR7 220 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 TMEM230Q96A57 120 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 RNF183Q96D59 192 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 CSTL1Q9H114 145 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 KLK11Q9UBX7 282 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 CACFD1Q9UGQ2 172 aa9.35□□□□□ -0.91
SNX1-209ENST00000559961 IGHV3-49A0A0A0MS15 119 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 TEX13DA0A0J9YY54 714 aaPredicted RBP9.34□□□□□ -0.91
SNX1-209ENST00000559961 RPS10-NUDT3A0A1W2PQS6 291 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 DISC1C4P0D8 188 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 RAB3DO95716 219 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 IGHV3-48P01763 117 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 CD3DP04234 171 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 PI3P19957 117 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 NPPCP23582 126 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 EIF2B2P49770 351 aaKnown RBP9.34□□□□□ -0.91
SNX1-209ENST00000559961 PPP5CP53041 499 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 MRPS10P82664 201 aaKnown RBP9.34□□□□□ -0.91
SNX1-209ENST00000559961 MEF2DQ14814 521 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 ZNF600Q6ZNG1 722 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 TCF24Q7RTU0 167 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 GBGT1Q8N5D6 347 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 TMEM229BQ8NBD8 167 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 OR52I2Q8NH67 350 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 GATAD1Q8WUU5 269 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 OR10C1Q96KK4 312 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 MAP6D1Q9H9H5 199 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 RABL2AQ9UBK7 228 aaPredicted RBP9.34□□□□□ -0.91
SNX1-209ENST00000559961 MTFP1Q9UDX5 166 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 RABL2BQ9UNT1 228 aa9.34□□□□□ -0.91
SNX1-209ENST00000559961 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 TRAV30A0A087WSZ9 112 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 DFFBO76075 338 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 LY6G6CO95867 125 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 IGKV1-39P01597 117 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 IGKV1D-39P04432 117 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 OPRK1P41145 380 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 SSBP1Q04837 148 aaKnown RBP9.33□□□□□ -0.92
SNX1-209ENST00000559961 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 SPINK9Q5DT21 86 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 GPR107Q5VW38 600 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 STEAP1BQ6NZ63 245 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 GPR141Q7Z602 305 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 APRG1Q8IVJ8 170 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 METTL26Q96S19 204 aa9.33□□□□□ -0.92
SNX1-209ENST00000559961 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.33□□□□□ -0.92
SNX1-209ENST00000559961 IGHV3OR16-13A0A075B7E8 117 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 IGHV3-74A0A0B4J1X5 117 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 F8W735 103 aaPredicted RBP9.32□□□□□ -0.92
SNX1-209ENST00000559961 IFNA4P05014 189 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 ATF4P18848 351 aaPredicted RBP9.32□□□□□ -0.92
SNX1-209ENST00000559961 ETV6P41212 452 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 DHODHQ02127 395 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 CEMP1Q6PRD7 247 aaPredicted RBP9.32□□□□□ -0.92
SNX1-209ENST00000559961 TOMM20LQ6UXN7 152 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 NOXA1Q86UR1 476 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 STHQ8IWL8 128 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 SCGB3A2Q96PL1 93 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 RARRES2Q99969 163 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 MFFQ9GZY8 342 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 HEYLQ9NQ87 328 aaPredicted RBP9.32□□□□□ -0.92
SNX1-209ENST00000559961 RABAC1Q9UI14 185 aa9.32□□□□□ -0.92
SNX1-209ENST00000559961 KCNIP3Q9Y2W7 256 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms