RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SUB1P53999 127 aaKnown RBP eCLIP9.63□□□□□ -0.87
GABPB1-208ENST00000558970 ID3Q02535 119 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 RAB32Q13637 225 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 PDLIM3Q53GG5 364 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-208ENST00000558970 SPANXN5Q5MJ07 72 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 NECAP1Q8NC96 275 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 OR11H7Q8NGC8 314 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 OR1P1Q8NH06 330 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 MYOZ3Q8TDC0 251 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 ZFP57Q9NU63 452 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 A0A0G2JLM5 398 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 PPP5D1E7EU14 171 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 K7EPK0 472 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 WIPF1O43516 503 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 TRBV12-3P01733 135 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 PF4P02776 101 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 LGALS1P09382 135 aaKnown RBP9.62□□□□□ -0.87
GABPB1-208ENST00000558970 OPRK1P41145 380 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 RRAS2P62070 204 aaPredicted RBP9.62□□□□□ -0.87
GABPB1-208ENST00000558970 CLEC19AQ6UXS0 136 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 ZNF114Q8NC26 417 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 OR11H1Q8NG94 326 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 TMEM170AQ8WVE7 144 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 C4orf3Q8WVX3 66 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 PSENENQ9NZ42 101 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 THYN1Q9P016 225 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 CACFD1Q9UGQ2 172 aa9.62□□□□□ -0.87
GABPB1-208ENST00000558970 IGHV4OR15-8A0A075B7B6 117 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 A0A087WW49 117 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 INS-IGF2F8WCM5 200 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 L7N2F9 121 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 M0QZ24 198 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 MT-CO2P00403 227 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 IFNA4P05014 189 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 OR8U8P0C7N1 319 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 VAMP2P63027 116 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 MLANAQ16655 118 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 Q56UQ5 140 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 SCARB1Q8WTV0 552 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 EEF1AKMT3Q96AZ1 226 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 RAX2Q96IS3 184 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 USMG5Q96IX5 58 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 CCDC140Q96MF4 163 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 CIB3Q96Q77 187 aaPredicted RBP9.61□□□□□ -0.87
GABPB1-208ENST00000558970 OR4C12Q96R67 309 aa9.61□□□□□ -0.87
GABPB1-208ENST00000558970 MEGF8Q7Z7M0 2845 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 IGHV3-35A0A0C4DH35 117 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 OR2T8A6NH00 312 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 C15orf62A8K5M9 175 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 I3L521 148 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 K7EIM0 57 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 CCNKO75909 580 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 TMEM50AO95807 157 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 GPR183P32249 361 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 BCAP31P51572 246 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 SLURP1P55000 103 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 BSXQ3C1V8 233 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 ETV3LQ6ZN32 361 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 DPF1Q92782 380 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 NMES1Q9C002 83 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 STRAPQ9Y3F4 350 aaKnown RBP9.6□□□□□ -0.87
GABPB1-208ENST00000558970 U3KQ87 197 aa9.6□□□□□ -0.87
GABPB1-208ENST00000558970 I3L2K1 104 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 CCL24O00175 119 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 BRI3O95415 125 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 ARL3P36405 182 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 CAV2P51636 162 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 PAX9P55771 341 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 RAB11AP62491 216 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 OR8G2PQ6IF36 304 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 ZNF343Q6P1L6 599 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 OR4F17Q8NGA8 305 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 PPP1R1CQ8WVI7 109 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 CXorf58Q96LI9 332 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 OR4F4Q96R69 305 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 RAB40CQ96S21 281 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 FNDC4Q9H6D8 234 aaPredicted RBP9.59□□□□□ -0.87
GABPB1-208ENST00000558970 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
GABPB1-208ENST00000558970 MRPL36Q9P0J6 103 aaKnown RBP9.59□□□□□ -0.87
GABPB1-208ENST00000558970 PEF1Q9UBV8 284 aaKnown RBP9.59□□□□□ -0.87
GABPB1-208ENST00000558970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.58□□□□□ -0.88
GABPB1-208ENST00000558970 FAM24AA6NFZ4 105 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 LINC01619G3V211 115 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 CORTO00230 105 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 CLEC3BP05452 202 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 METTL15P1P0C7V9 234 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 PVALBP20472 110 aaPredicted RBP9.58□□□□□ -0.88
GABPB1-208ENST00000558970 RPP30P78346 268 aaKnown RBP9.58□□□□□ -0.88
GABPB1-208ENST00000558970 ZNF616Q08AN1 781 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 IL15RAQ13261 267 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 ACY3Q96HD9 319 aa9.58□□□□□ -0.88
GABPB1-208ENST00000558970 SMIM8Q96KF7 97 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms