RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 U3KQK5 164 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 IGHV3-49A0A0A0MS15 119 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 A0A0B4J293 547 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 ANKRD20A5PA0PJZ0 165 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 CTDSPLO15194 276 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 TPPPO94811 219 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 YIF1AO95070 293 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 CD7P09564 240 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 PTBP1P26599 531 aaKnown RBP eCLIP9.08□□□□□ -0.96
TPM1-216ENST00000558910 ERHP84090 104 aaKnown RBP9.08□□□□□ -0.96
TPM1-216ENST00000558910 SSBP1Q04837 148 aaKnown RBP9.08□□□□□ -0.96
TPM1-216ENST00000558910 FAM209BQ5JX69 171 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 TMEM268Q5VZI3 342 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 TMED4Q7Z7H5 227 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 Q8N1Y9 231 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 Q8N402 240 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 LHFPL5Q8TAF8 219 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 PRRT1Q99946 306 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 SRSF8Q9BRL6 282 aaKnown RBP9.08□□□□□ -0.96
TPM1-216ENST00000558910 ENY2Q9NPA8 101 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 SCP2D1Q9UJQ7 156 aa9.08□□□□□ -0.96
TPM1-216ENST00000558910 IGHV3OR16-13A0A075B7E8 117 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 IGHV3-74A0A0B4J1X5 117 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 TMEM213A2RRL7 107 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 K7EIM0 57 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 GSTZ1O43708 216 aaPredicted RBP9.07□□□□□ -0.96
TPM1-216ENST00000558910 ATG12O94817 140 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 MT-CO2P00403 227 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 FGF2P09038 288 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 CBLN1P23435 193 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 SNCAP37840 140 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 PRCDQ00LT1 54 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 DEFB114Q30KQ6 69 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 ZNF57Q68EA5 555 aaPredicted RBP9.07□□□□□ -0.96
TPM1-216ENST00000558910 THOC7Q6I9Y2 204 aaKnown RBP9.07□□□□□ -0.96
TPM1-216ENST00000558910 Q6ZRM9 215 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 HSD17B13Q7Z5P4 300 aaPredicted RBP9.07□□□□□ -0.96
TPM1-216ENST00000558910 GPHB5Q86YW7 130 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 SELENOHQ8IZQ5 122 aaKnown RBP9.07□□□□□ -0.96
TPM1-216ENST00000558910 TOMM5Q8N4H5 51 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 OR2C3Q8N628 320 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 DEFB125Q8N687 156 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 NXF2Q9GZY0 626 aaKnown RBP9.07□□□□□ -0.96
TPM1-216ENST00000558910 MLXQ9UH92 298 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 GPR132Q9UNW8 380 aa9.07□□□□□ -0.96
TPM1-216ENST00000558910 IGKV3-7A0A075B6H7 116 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 ZNF785A8K8V0 405 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
TPM1-216ENST00000558910 UCP1P25874 307 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 OR1P1Q8NH06 330 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 VN1R17PQ8TDU5 208 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 GLYATL2Q8WU03 294 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 TMEM230Q96A57 120 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 GPR146Q96CH1 333 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 NEURL2Q9BR09 285 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 KRTAP17-1Q9BYP8 105 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 TMEM222Q9H0R3 208 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 RBM38Q9H0Z9 239 aaKnown RBP9.06□□□□□ -0.96
TPM1-216ENST00000558910 FAM212BQ9NTI7 297 aaPredicted RBP9.06□□□□□ -0.96
TPM1-216ENST00000558910 RABL2AQ9UBK7 228 aaPredicted RBP9.06□□□□□ -0.96
TPM1-216ENST00000558910 CACNG5Q9UF02 275 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 RABL2BQ9UNT1 228 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 V9GYH0 126 aa9.06□□□□□ -0.96
TPM1-216ENST00000558910 CRYM-AS1A6NIL9 109 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 CEBPZOSA8MTT3 80 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 LGALS9O00182 355 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 INPP1P49441 399 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 MLANAQ16655 118 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 RBPMS2Q6ZRY4 209 aaKnown RBP9.05□□□□□ -0.96
TPM1-216ENST00000558910 TMEM61Q8N0U2 210 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
TPM1-216ENST00000558910 RCHY1Q96PM5 261 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 SOSTQ9BQB4 213 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 ZMAT4Q9H898 229 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 RETNQ9HD89 108 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 PALMDQ9NP74 551 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 SLC2A8Q9NY64 477 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 UBQLN2Q9UHD9 624 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 UFC1Q9Y3C8 167 aa9.05□□□□□ -0.96
TPM1-216ENST00000558910 IGHV3-66A0A0C4DH42 116 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 I3L2K1 104 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 NUPL2O15504 423 aaKnown RBP9.04□□□□□ -0.96
TPM1-216ENST00000558910 GNG7O60262 68 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 P0C879 139 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 TFPI2P48307 235 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 MFAP4P55083 255 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 DHODHQ02127 395 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 KLF9Q13886 244 aaPredicted RBP9.04□□□□□ -0.96
TPM1-216ENST00000558910 ZNF79Q15937 498 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 OR52B4Q8NGK2 314 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 OR1L6Q8NGR2 347 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 RBPMSQ93062 196 aaKnown RBP9.04□□□□□ -0.96
TPM1-216ENST00000558910 WWC2-AS2Q96NR7 200 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 FAM110AQ9BQ89 295 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 SRD5A3Q9H8P0 318 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 HEYLQ9NQ87 328 aaPredicted RBP9.04□□□□□ -0.96
TPM1-216ENST00000558910 SIGLEC8Q9NYZ4 499 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 KCNIP3Q9Y2W7 256 aa9.04□□□□□ -0.96
TPM1-216ENST00000558910 OR11H12B2RN74 326 aa9.03□□□□□ -0.96
TPM1-216ENST00000558910 CDS2O95674 445 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms