RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
VPS18-202ENST00000558474 PRSS46E5RG02 174 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 BCL2L11O43521 198 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 CST7O76096 145 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 REG1AP05451 166 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 DLK1P80370 383 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 ARPC5LQ9BPX5 153 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 ARL6Q9H0F7 186 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 PAIP2BQ9ULR5 123 aaKnown RBP11.69□□□□□ -0.54
VPS18-202ENST00000558474 ZFHX3Q15911 3703 aa11.69□□□□□ -0.54
VPS18-202ENST00000558474 IGLV11-55A0A075B6I3 123 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 PPIFP30405 207 aaKnown RBP11.68□□□□□ -0.54
VPS18-202ENST00000558474 NKX2-5P52952 324 aaPredicted RBP11.68□□□□□ -0.54
VPS18-202ENST00000558474 CD69Q07108 199 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 SLC38A11Q08AI6 406 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 ZNF266Q14584 549 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 ECSCRQ19T08 205 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 VWC2Q2TAL6 325 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 ARSJQ5FYB0 599 aaPredicted RBP11.68□□□□□ -0.54
VPS18-202ENST00000558474 OR8G2PQ6IF36 304 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 OR2T6Q8NHC8 308 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
VPS18-202ENST00000558474 C16orf95Q9H693 158 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 FBXL17Q9UF56 701 aa11.68□□□□□ -0.54
VPS18-202ENST00000558474 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
VPS18-202ENST00000558474 TRBV9A0A0B4J1U6 114 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 JTBO76095 146 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 NDUFA7O95182 113 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 APELAP0DMC3 54 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 EIF5AP63241 154 aaKnown RBP11.67□□□□□ -0.54
VPS18-202ENST00000558474 SLC35B1P78383 322 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 CFHR3Q02985 330 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 OPCMLQ14982 345 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 SLC25A24Q6NUK1 477 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 Q6ZS46 218 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 HAPLN4Q86UW8 402 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 FANCD2OSQ96PS1 177 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 ATP5SQ99766 215 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 TMEM147Q9BVK8 224 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 SLA2Q9H6Q3 261 aa11.67□□□□□ -0.54
VPS18-202ENST00000558474 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 G3V318 75 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 IGLV1-40P01703 118 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 MFAP2P55001 183 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 Q6ZSV7 163 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 SLC51BQ86UW2 128 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 COMMD1Q8N668 190 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 TMEM217Q8N7C4 229 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 UBAC2Q8NBM4 344 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 OR5T1Q8NG75 326 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 ATP6V0BQ99437 205 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
VPS18-202ENST00000558474 NSD1Q96L73 2696 aaPredicted RBP11.66□□□□□ -0.54
VPS18-202ENST00000558474 FAM223BA6NKX1 122 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 IGHG4P01861 327 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 OPRK1P41145 380 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 FAM223AQ8IWN6 122 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 NECAP1Q8NC96 275 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 VN1R17PQ8TDU5 208 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 MISP3Q96FF7 219 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 NPVFQ9HCQ7 196 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 DMRT1Q9Y5R6 373 aa11.65□□□□□ -0.54
VPS18-202ENST00000558474 F8P00451 2351 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 I3L2K1 104 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 MPDU1O75352 247 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 IFNA5P01569 189 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 SLC16A13Q7RTY0 426 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 BSCL2Q96G97 398 aaPredicted RBP11.64□□□□□ -0.55
VPS18-202ENST00000558474 USMG5Q96IX5 58 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 SLC35E1Q96K37 410 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 CXorf58Q96LI9 332 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 NOL4LQ96MY1 436 aaPredicted RBP11.64□□□□□ -0.55
VPS18-202ENST00000558474 TXN2Q99757 166 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 CYTL1Q9NRR1 136 aa11.64□□□□□ -0.55
VPS18-202ENST00000558474 PSMB11A5LHX3 300 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 K7EIM0 57 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 SOX15O60248 233 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 MT-CO2P00403 227 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 ELANEP08246 267 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 MDKP21741 143 aaPredicted RBP11.63□□□□□ -0.55
VPS18-202ENST00000558474 FCGR2BP31994 310 aaPredicted RBP11.63□□□□□ -0.55
VPS18-202ENST00000558474 FOXE3Q13461 319 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 CLINT1Q14677 625 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 TEX38Q6PEX7 206 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 SMIM3Q9BZL3 60 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 ARV1Q9H2C2 271 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 FNDC4Q9H6D8 234 aaPredicted RBP11.63□□□□□ -0.55
VPS18-202ENST00000558474 WFDC1Q9HC57 220 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 ZNF355PQ9NSJ1 428 aa11.63□□□□□ -0.55
VPS18-202ENST00000558474 GAR1Q9NY12 217 aaKnown RBP11.63□□□□□ -0.55
VPS18-202ENST00000558474 LINC00527Q9UJ94 153 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms