RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 Q6ZR54 194 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 BEST4Q8NFU0 473 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 STXBP6Q8NFX7 210 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 BORCS5Q969J3 196 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 PRNDQ9UKY0 176 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 NSG2Q9Y328 171 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 A0A1W2PS18 150 aa12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 KNCNA6PVL3 124 aa12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 APOHP02749 345 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 ACTL10Q5JWF8 245 aa12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 TOMM20LQ6UXN7 152 aa12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 ZNF818PQ6ZRF7 136 aa12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 TMEM17Q86X19 198 aa12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 PINX1Q96BK5 328 aaKnown RBP12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 SCRT1Q9BWW7 348 aa12.81□□□□□ -0.36
TSPAN3-204ENST00000558394 I3L2K1 104 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 RGS10O43665 173 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 SSX5O60225 188 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 MT-CO2P00403 227 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 KRASP01116 189 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 IGHV3-48P01763 117 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 PTHLHP12272 177 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 LILRB2Q8N423 598 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 MOB3AQ96BX8 217 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 GRAMD2BQ96HH9 432 aa12.8□□□□□ -0.36
TSPAN3-204ENST00000558394 CD74P04233 296 aa12.79□□□□□ -0.36
TSPAN3-204ENST00000558394 ZNF688P0C7X2 276 aa12.79□□□□□ -0.36
TSPAN3-204ENST00000558394 HERV-K104P61576 105 aa12.79□□□□□ -0.36
TSPAN3-204ENST00000558394 NUTF2P61970 127 aaKnown RBP12.79□□□□□ -0.36
TSPAN3-204ENST00000558394 FAM210BQ96KR6 192 aa12.79□□□□□ -0.36
TSPAN3-204ENST00000558394 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
TSPAN3-204ENST00000558394 PUS1Q9Y606 427 aaKnown RBP eCLIP12.79□□□□□ -0.36
TSPAN3-204ENST00000558394 SMIM30A4D0T7 59 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 NPPCP23582 126 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 F2RP25116 425 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 G6PCP35575 357 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 NPBWR1P48145 328 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 ZNF600Q6ZNG1 722 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 CSNK1G2-AS1Q8NCQ2 148 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 NARS2Q96I59 477 aaKnown RBP12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 TSC22D3Q99576 134 aa12.78□□□□□ -0.36
TSPAN3-204ENST00000558394 K7EQG2 157 aa12.77□□□□□ -0.37
TSPAN3-204ENST00000558394 RLN1P04808 185 aa12.77□□□□□ -0.37
TSPAN3-204ENST00000558394 SPART-AS1P0CW21 52 aa12.77□□□□□ -0.37
TSPAN3-204ENST00000558394 LPAR6P43657 344 aa12.77□□□□□ -0.37
TSPAN3-204ENST00000558394 RNF212Q495C1 297 aa12.77□□□□□ -0.37
TSPAN3-204ENST00000558394 EIF2B2P49770 351 aaKnown RBP12.76□□□□□ -0.37
TSPAN3-204ENST00000558394 HOGA1Q86XE5 327 aa12.76□□□□□ -0.37
TSPAN3-204ENST00000558394 CADM3Q8N126 398 aa12.76□□□□□ -0.37
TSPAN3-204ENST00000558394 FCAMRQ8WWV6 532 aa12.76□□□□□ -0.37
TSPAN3-204ENST00000558394 METTL26Q96S19 204 aa12.76□□□□□ -0.37
TSPAN3-204ENST00000558394 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
TSPAN3-204ENST00000558394 NOTOA8MTQ0 251 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 FCER2P06734 321 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 EMP1P54849 157 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 AQP4P55087 323 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 ERHP84090 104 aaKnown RBP12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 C22orf42Q6IC83 251 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 RNF167Q9H6Y7 350 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 XCL2Q9UBD3 114 aa12.75□□□□□ -0.37
TSPAN3-204ENST00000558394 TRDV1A0A1B0GX56 115 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 TMEM189A5PLL7 270 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 PGLYRP1O75594 196 aaPredicted RBP12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 GNRHRP30968 328 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 P2RY1P47900 373 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 CMTM1Q8IZ96 169 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 Q8N1X5 172 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 ZNF114Q8NC26 417 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 RAB40CQ96S21 281 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 SCRT2Q9NQ03 307 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 DAPK2Q9UIK4 370 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 TMED3Q9Y3Q3 217 aa12.74□□□□□ -0.37
TSPAN3-204ENST00000558394 TRAV18A0A075B6X5 111 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 DBX1A6NMT0 343 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 SCGB2A1O75556 95 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 FGF9P31371 208 aaPredicted RBP12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 DHRS2Q13268 280 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 KCTD21Q4G0X4 260 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 PSMG4Q5JS54 123 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 ZNF367Q7RTV3 350 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 OR5AP2Q8NGF4 316 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 RHBDL2Q9NX52 303 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
TSPAN3-204ENST00000558394 HELTA6NFD8 242 aa12.72□□□□□ -0.37
TSPAN3-204ENST00000558394 ANKRD65E5RJM6 399 aa12.72□□□□□ -0.37
TSPAN3-204ENST00000558394 HTN3P15516 51 aa12.72□□□□□ -0.37
TSPAN3-204ENST00000558394 TNP2Q05952 138 aa12.72□□□□□ -0.37
TSPAN3-204ENST00000558394 LGALS14Q8TCE9 139 aa12.72□□□□□ -0.37
TSPAN3-204ENST00000558394 TMEM230Q96A57 120 aa12.72□□□□□ -0.37
TSPAN3-204ENST00000558394 NDUFB11Q9NX14 153 aa12.72□□□□□ -0.37
TSPAN3-204ENST00000558394 A0A1B0GU03 582 aa12.71□□□□□ -0.37
TSPAN3-204ENST00000558394 TMEM50AO95807 157 aa12.71□□□□□ -0.37
TSPAN3-204ENST00000558394 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
TSPAN3-204ENST00000558394 H2BFWTQ7Z2G1 175 aa12.71□□□□□ -0.37
TSPAN3-204ENST00000558394 DCANP1Q8TF63 244 aa12.71□□□□□ -0.37
TSPAN3-204ENST00000558394 NIPSNAP3BQ9BS92 247 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms