RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 COLCA1Q6ZS62 124 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 PPP1R32Q7Z5V6 425 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 CD55P08174 381 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 OR52E5Q8NH55 327 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 SLC25A28Q96A46 364 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 OR4X2Q8NGF9 303 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 SEMA5BQ9P283 1151 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 CXCL1P09341 107 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 Q71RC1 249 aaPredicted RBP11.74□□□□□ -0.53
SPG11-210ENST00000558319 PILRAQ9UKJ1 303 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 DPM2O94777 84 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 MALP21145 153 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 ZNF837Q96EG3 531 aaPredicted RBP11.74□□□□□ -0.53
SPG11-210ENST00000558319 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
SPG11-210ENST00000558319 CCL3L1P16619 93 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 DEPPQ9NTK1 212 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 COX11Q9Y6N1 276 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 IGKV1D-42A0A075B6H8 117 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 CHTOPQ9Y3Y2 248 aaKnown RBP11.73□□□□□ -0.53
SPG11-210ENST00000558319 ADAMTSL3P82987 1691 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 IGKV1D-43A0A0B4J1Z2 117 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A10PA6NDY2 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A18PA6NE21 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A16PA6NEW6 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A20PA6NIJ5 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A8PA6NJQ4 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A7PA6NKC0 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A22PA8MWA6 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A12PA8MX19 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A5PA8MXJ8 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A23PA8MXZ1 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A15PP0C7V4 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A13PP0C7W8 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A14PP0C7W9 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 FAM90A24PP0C7X0 464 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 CYSLTR1Q9Y271 337 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
SPG11-210ENST00000558319 HBDP02042 147 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 GZMBP10144 247 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 GDF15Q99988 308 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 PKIBQ9C010 78 aa11.73□□□□□ -0.53
SPG11-210ENST00000558319 WISP3O95389 354 aaPredicted RBP11.72□□□□□ -0.53
SPG11-210ENST00000558319 IGKCP01834 107 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 SRSF7Q16629 238 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPG11-210ENST00000558319 GTSCR1Q86UQ5 136 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 FAM89BQ8N5H3 189 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
SPG11-210ENST00000558319 SFXN3Q9BWM7 321 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 DLEU1O43261 78 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 SLC25A2Q9BXI2 301 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 PSG1P11464 419 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 ZNF318Q5VUA4 2279 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 A0A087X0K7 114 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
SPG11-210ENST00000558319 CCL20P78556 96 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 CFAP161Q6P656 301 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 MESP1Q9BRJ9 268 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 APOBEC3AP31941 199 aaPredicted RBP11.72□□□□□ -0.53
SPG11-210ENST00000558319 PPP1R27Q86WC6 154 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 RNF126Q9BV68 326 aa11.72□□□□□ -0.53
SPG11-210ENST00000558319 hDV102S1A0JD36 115 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 SLC25A20O43772 301 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 EGR4Q05215 589 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 CD300EQ496F6 205 aaPredicted RBP11.71□□□□□ -0.53
SPG11-210ENST00000558319 GLRX5Q86SX6 157 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 TMEM219Q86XT9 240 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 MTCL1Q9Y4B5 1905 aaKnown RBP11.71□□□□□ -0.53
SPG11-210ENST00000558319 STHQ8IWL8 128 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 OR9G1Q8NH87 305 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
SPG11-210ENST00000558319 MRPL20Q9BYC9 149 aaKnown RBP11.71□□□□□ -0.53
SPG11-210ENST00000558319 ICE1Q9Y2F5 2266 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 TNFRSF6BO95407 300 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 CECR9P0C854 216 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 HEPN1Q6WQI6 88 aa11.71□□□□□ -0.53
SPG11-210ENST00000558319 H7C1H1 209 aa11.71□□□□□ -0.54
SPG11-210ENST00000558319 AMBPP02760 352 aa11.71□□□□□ -0.54
SPG11-210ENST00000558319 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.54
SPG11-210ENST00000558319 LINC01590Q5TEZ4 76 aa11.71□□□□□ -0.54
SPG11-210ENST00000558319 RNF182Q8N6D2 247 aa11.71□□□□□ -0.54
SPG11-210ENST00000558319 ZNF525Q8N782 197 aa11.71□□□□□ -0.54
SPG11-210ENST00000558319 A0A0G2JLM5 398 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 LCNL1Q6ZST4 164 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 ASCL2Q99929 193 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 ESDP10768 282 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 HEATR5BQ9P2D3 2071 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 VDAC2P45880 294 aaPredicted RBP11.7□□□□□ -0.54
SPG11-210ENST00000558319 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 KIF13BQ9NQT8 1826 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 RPL35AP18077 110 aaKnown RBP11.7□□□□□ -0.54
SPG11-210ENST00000558319 PTGDSP41222 190 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 GATD1Q8NB37 220 aa11.7□□□□□ -0.54
SPG11-210ENST00000558319 KBTBD11-OT1A0A1B0GTJ5 212 aa11.69□□□□□ -0.54
SPG11-210ENST00000558319 PYYP10082 97 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms