RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 UHRF2Q96PU4 802 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 C7orf50Q9BRJ6 194 aaKnown RBP3.91□□□□□ -1.78
ATXN3-245ENST00000556958 FAAP24Q9BTP7 215 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 GABARAPL3Q9BY60 117 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 OR2D2Q9H210 308 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 VCXQ9H320 206 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 BANF2Q9H503 90 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 HEYLQ9NQ87 328 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-245ENST00000556958 RDH8Q9NYR8 311 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 TAS2R4Q9NYW5 299 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 PRELID3BQ9Y3B1 194 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 RBM7Q9Y580 266 aaKnown RBP3.91□□□□□ -1.78
ATXN3-245ENST00000556958 H3BMM0 161 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 SIVA1O15304 175 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 KBTBD11O94819 623 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 NAPSAO96009 420 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 CTSGP08311 255 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 CRHBPP24387 322 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 DUTP33316 252 aaKnown RBP3.9□□□□□ -1.79
ATXN3-245ENST00000556958 SNRPD3P62318 126 aaKnown RBP3.9□□□□□ -1.79
ATXN3-245ENST00000556958 RPL8P62917 257 aaKnown RBP3.9□□□□□ -1.79
ATXN3-245ENST00000556958 MRPL28Q13084 256 aaKnown RBP3.9□□□□□ -1.79
ATXN3-245ENST00000556958 ESRGQ1W209 222 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 MEDAGQ5VYS4 303 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 OR10K2Q6IF99 312 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 RXFP4Q8TDU9 374 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 GPR148Q8TDV2 347 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 ZNF184Q99676 751 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-245ENST00000556958 MRPS7Q9Y2R9 242 aaKnown RBP3.9□□□□□ -1.79
ATXN3-245ENST00000556958 NACAE9PAV3 2078 aa3.9□□□□□ -1.79
ATXN3-245ENST00000556958 TRBV6-6A0A0A6YYG2 114 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 HELTA6NFD8 242 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 PTGES3LE9PB15 166 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 K7EP13 123 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 FCGR3BO75015 233 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 HLA-GP17693 338 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 NPPCP23582 126 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 GBX2P52951 348 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 AP2S1P53680 142 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 BLOC1S1P78537 153 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 HLA-DRB3P79483 266 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 ACOT6Q3I5F7 207 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 PSMG4Q5JS54 123 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 RBM48Q5RL73 367 aaKnown RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 AWAT2Q6E213 333 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 ZNF773Q6PK81 442 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 Q6ZNX1 250 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 HSD17B13Q7Z5P4 300 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 C8orf59Q8N0T1 100 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 CADM3Q8N126 398 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 JAGN1Q8N5M9 183 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 ACBD7Q8N6N7 88 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 BPIFB6Q8NFQ5 453 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 OR52I1Q8NGK6 324 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 OR4C16Q8NGL9 310 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 RHOXF1Q8NHV9 184 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 SCARB1Q8WTV0 552 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 MUL1Q969V5 352 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 LGALS12Q96DT0 336 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 NARS2Q96I59 477 aaKnown RBP3.89□□□□□ -1.79
ATXN3-245ENST00000556958 C4orf36Q96KX1 117 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 TXN2Q99757 166 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 ARPC5LQ9BPX5 153 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 PDCD1LG2Q9BQ51 273 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 PLEKHJ1Q9NW61 149 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 CKLFQ9UBR5 152 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
ATXN3-245ENST00000556958 IGHV3-66A0A0C4DH42 116 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 PNMA8CA0A1B0GUJ8 204 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 HRASP01112 189 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 MYL12AP19105 171 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 M6PRP20645 277 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 MFAP4P55083 255 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 DHRS2Q13268 280 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 OR5I1Q13606 314 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 OR2G6Q5TZ20 316 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 THOC7Q6I9Y2 204 aaKnown RBP3.88□□□□□ -1.79
ATXN3-245ENST00000556958 TMPRSS11AQ6ZMR5 421 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 Q6ZSA8 131 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 C6orf201Q7Z4U5 140 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 CDH26Q8IXH8 852 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 VKORC1L1Q8N0U8 176 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 PUSL1Q8N0Z8 303 aaKnown RBP3.88□□□□□ -1.79
ATXN3-245ENST00000556958 PACRGLQ8N7B6 248 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 GDPD1Q8N9F7 314 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 OR10J5Q8NHC4 309 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 FCGR1BQ92637 280 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 TMEM80Q96HE8 168 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 TMEM208Q9BTX3 173 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 CENPOQ9BU64 300 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 COMMD5Q9GZQ3 224 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 CCDC90BQ9GZT6 254 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 NXF2Q9GZY0 626 aaKnown RBP3.88□□□□□ -1.79
ATXN3-245ENST00000556958 VCX3BQ9H321 246 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 SEPSECSQ9HD40 501 aaKnown RBP3.88□□□□□ -1.79
ATXN3-245ENST00000556958 C8orf4Q9NR00 106 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 SCN3BQ9NY72 215 aa3.88□□□□□ -1.79
ATXN3-245ENST00000556958 TRAV26-1A0A087WT03 109 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms