RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ID3Q02535 119 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 C22orf42Q6IC83 251 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 Q6ZNX1 250 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 ZNF818PQ6ZRF7 136 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 ZNF767PQ75MW2 155 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 TMEM17Q86X19 198 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 STHQ8IWL8 128 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 CENPSQ8N2Z9 138 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 ST8SIA2Q92186 375 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 MISP3Q96FF7 219 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 CLUHP3Q96NS8 147 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 RNF126Q9BV68 326 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 NXF2Q9GZY0 626 aaKnown RBP6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 COMMD9Q9P000 198 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 OR51B2Q9Y5P1 312 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 PKD1P98161 4303 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 TRDV1A0A1B0GX56 115 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 DBX1A6NMT0 343 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 SCGNO76038 276 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 KRASP01116 189 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 APOHP02749 345 aaPredicted RBP6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 AMBPP02760 352 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 CD5P06127 495 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 P0DMU3 169 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 FAM231AP0DMU4 169 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 FAM231CP0DMU5 169 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 C4BPBP20851 252 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 MFAP4P55083 255 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 PRSS48Q7RTY5 328 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 ZNF575Q86XF7 245 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 OR1P1Q8NH06 330 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 FCAMRQ8WWV6 532 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 SCRT1Q9BWW7 348 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 NDUFB11Q9NX14 153 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 RHBDL2Q9NX52 303 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 CELA1Q9UNI1 258 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 X6R8D5 127 aa6.52□□□□□ -1.37
HNRNPC-227ENST00000556897 HSPG2P98160 4391 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 DEFB131BA0A096LNP1 70 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 NOTOA8MTQ0 251 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 ZNF705EA8MWA4 302 aaPredicted RBP6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 I3L2K1 104 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 SNAPC5O75971 98 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 MT-CO2P00403 227 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 RLN1P04808 185 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 EIF4EP06730 217 aaKnown RBP6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 GNRHRP30968 328 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 G6PCP35575 357 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 RPL5P46777 297 aaKnown RBP6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 SPCS2Q15005 226 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 C12orf74Q32Q52 190 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 TMEM41BQ5BJD5 291 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 TOMM20LQ6UXN7 152 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 ZNF367Q7RTV3 350 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 TRPT1Q86TN4 253 aaKnown RBP6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 HOGA1Q86XE5 327 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 LGALS14Q8TCE9 139 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 TMEM56Q96MV1 263 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 GINS3Q9BRX5 216 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 NDUFAF3Q9BU61 184 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 VSIRQ9H7M9 311 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 CLEC5AQ9NY25 188 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 RABAC1Q9UI14 185 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 DAPK2Q9UIK4 370 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 PRNDQ9UKY0 176 aa6.51□□□□□ -1.37
HNRNPC-227ENST00000556897 TRAV18A0A075B6X5 111 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 TRAV2A0A0B4J234 112 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 KNCNA6PVL3 124 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 GNG7O60262 68 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 PGLYRP1O75594 196 aaPredicted RBP6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 SPP1P10451 314 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 F2RP25116 425 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 LPAR6P43657 344 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 AQP4P55087 323 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 SUMO1P63165 101 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 TBCEQ15813 527 aaPredicted RBP6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 LGALS9BQ3B8N2 356 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 UBE2UQ5VVX9 321 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 MORN3Q6PF18 240 aaPredicted RBP6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 DUSP18Q8NEJ0 188 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 TSPAN14Q8NG11 270 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 PINX1Q96BK5 328 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 TXN2Q99757 166 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 TMEM14BQ9NUH8 114 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 TBC1D24Q9ULP9 559 aa6.5□□□□□ -1.37
HNRNPC-227ENST00000556897 IGLV2-18A0A075B6J9 118 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 ZNF688P0C7X2 276 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 HERV-K104P61576 105 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 ACTL10Q5JWF8 245 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 SFXN4Q6P4A7 337 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 TPRA1Q86W33 373 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 CSNK1G2-AS1Q8NCQ2 148 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 STXBP6Q8NFX7 210 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 OR5AP2Q8NGF4 316 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 BORCS5Q969J3 196 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 FKBP11Q9NYL4 201 aa6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 PUS1Q9Y606 427 aaKnown RBP eCLIP6.49□□□□□ -1.37
HNRNPC-227ENST00000556897 A0A1B0GU03 582 aa6.48□□□□□ -1.37
HNRNPC-227ENST00000556897 MEIS3P1A6NDR6 274 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms