RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ZNF221Q9UK13 617 aa3.52□□□□□ -1.85
HIF1A-209ENST00000556827 WASHC3Q9Y3C0 194 aa3.52□□□□□ -1.85
HIF1A-209ENST00000556827 NUBP2Q9Y5Y2 271 aa3.52□□□□□ -1.85
HIF1A-209ENST00000556827 SC5DO75845 299 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 OR2A4O95047 310 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 NDUFA3O95167 84 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 BAG2O95816 211 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 UBBP0CG47 229 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 SAA2P0DJI9 122 aaPredicted RBP3.51□□□□□ -1.85
HIF1A-209ENST00000556827 CNTFRP26992 372 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 VHLP40337 213 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 RANBP1P43487 201 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 MAP2K4P45985 399 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 GTF2A1P52655 376 aaPredicted RBP3.51□□□□□ -1.85
HIF1A-209ENST00000556827 SYNJ2BPP57105 145 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 TAS2R43P59537 309 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 ADARB1P78563 741 aaKnown RBP3.51□□□□□ -1.85
HIF1A-209ENST00000556827 MRPS15P82914 257 aaKnown RBP3.51□□□□□ -1.85
HIF1A-209ENST00000556827 GNMTQ14749 295 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 GUCA2BQ16661 112 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 Q499Y3 187 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 YIF1BQ5BJH7 314 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 LY6G6FQ5SQ64 297 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 ZNF57Q68EA5 555 aaPredicted RBP3.51□□□□□ -1.85
HIF1A-209ENST00000556827 FAM131AQ6UXB0 335 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 ZNF833PQ6ZTB9 187 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 SLC16A13Q7RTY0 426 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 ZNF555Q8NEP9 628 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 OR5T1Q8NG75 326 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 OR2K2Q8NGT1 345 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 GRPEL2Q8TAA5 225 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 DYNLRB2Q8TF09 96 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 GHSRQ92847 366 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 PHB2Q99623 299 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 C9orf16Q9BUW7 83 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 BANF2Q9H503 90 aa3.51□□□□□ -1.85
HIF1A-209ENST00000556827 PEF1Q9UBV8 284 aaKnown RBP3.51□□□□□ -1.85
HIF1A-209ENST00000556827 COL7A1Q02388 2944 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 TRBV7-9A0A0J9YWB2 115 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 FCN1O00602 326 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 SOX15O60248 233 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CREBL2O60519 120 aaPredicted RBP3.5□□□□□ -1.85
HIF1A-209ENST00000556827 LY6G6CO95867 125 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CA2P00918 260 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CT45A6P0DMU7 189 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CT45A5P0DMU8 189 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CT45A7P0DMV0 189 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CEACAM6P40199 344 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 PSG5Q15238 335 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 TTC23Q5W5X9 447 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 GLT8D1Q68CQ7 371 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 ZFP1Q6P2D0 407 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 MOB1BQ7L9L4 216 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CEND1Q8N111 149 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 GAPTQ8N292 157 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CBR4Q8N4T8 237 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 OR52I1Q8NGK6 324 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 KCNG3Q8TAE7 436 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 SMIM19Q96E16 107 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 CYYR1Q96J86 154 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 SLC29A1Q99808 456 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 UQCC2Q9BRT2 126 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 FAM103A1Q9BTL3 118 aaKnown RBP3.5□□□□□ -1.85
HIF1A-209ENST00000556827 TMEM231Q9H6L2 316 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 PLEKHJ1Q9NW61 149 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 COA4Q9NYJ1 87 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 SIGLEC8Q9NYZ4 499 aa3.5□□□□□ -1.85
HIF1A-209ENST00000556827 KLK5Q9Y337 293 aaPredicted RBP3.5□□□□□ -1.85
HIF1A-209ENST00000556827 EXOSC1Q9Y3B2 195 aaKnown RBP3.5□□□□□ -1.85
HIF1A-209ENST00000556827 RBM7Q9Y580 266 aaKnown RBP3.5□□□□□ -1.85
HIF1A-209ENST00000556827 PRKDCP78527 4128 aaKnown RBP3.5□□□□□ -1.85
HIF1A-209ENST00000556827 TRAV8-7A0A075B6U6 113 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 LOC100130705A0A1B0GUX0 176 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RBMY1BA6NDE4 496 aaKnown RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RBMY1EA6NEQ0 496 aaKnown RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 NUPR2A6NF83 97 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 OR11H12B2RN74 326 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 H0YJW9 148 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 ITGB1BP1O14713 200 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RTL8CO15255 209 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RBMY1DP0C7P1 496 aaKnown RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 GSTT2P0CG29 244 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 GSTT2BP0CG30 244 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 LIMS3P0CW19 117 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 LIMS4P0CW20 117 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RRASP10301 218 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 IGFBP3P17936 291 aaPredicted RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 SERPINB10P48595 397 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 ETV1P50549 477 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 ATP5G2Q06055 141 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 TPBGQ13641 420 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 HMGN3Q15651 99 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RTL8BQ17RB0 113 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 VMA21Q3ZAQ7 101 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RPL39P5Q59GN2 51 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 DMKNQ6E0U4 476 aaPredicted RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 PDPNQ86YL7 162 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 DRAXINQ8NBI3 349 aaPredicted RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms