RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TMEM187Q14656 261 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 BAK1Q16611 211 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 FAM106AQ4KMX7 169 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 TM4SF20Q53R12 229 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 ZNF57Q68EA5 555 aaPredicted RBP7.84□□□□□ -1.15
SNX6-208ENST00000556712 TMED4Q7Z7H5 227 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 Q8N1Y9 231 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 WDR89Q96FK6 387 aaPredicted RBP7.84□□□□□ -1.15
SNX6-208ENST00000556712 BSCL2Q96G97 398 aaPredicted RBP7.84□□□□□ -1.15
SNX6-208ENST00000556712 ZNF414Q96IQ9 312 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 ZNF436Q9C0F3 470 aaPredicted RBP7.84□□□□□ -1.15
SNX6-208ENST00000556712 MLXQ9UH92 298 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 HUWE1Q7Z6Z7 4374 aaKnown RBP7.83□□□□□ -1.16
SNX6-208ENST00000556712 LINC00854A0A1B0GVQ3 168 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 ZNF207O43670 478 aaKnown RBP7.83□□□□□ -1.16
SNX6-208ENST00000556712 IGHV4-30-4P0DP06 118 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 RNASE2P10153 161 aaKnown RBP7.83□□□□□ -1.16
SNX6-208ENST00000556712 CBLN1P23435 193 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 ERHP84090 104 aaKnown RBP7.83□□□□□ -1.16
SNX6-208ENST00000556712 DEFB114Q30KQ6 69 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 TRIQKQ629K1 86 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 BTNL8Q6UX41 500 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 SBSPONQ8IVN8 264 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 FAM219AQ8IW50 185 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 UXS1Q8NBZ7 420 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 OR1L6Q8NGR2 347 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 TMEM190Q8WZ59 177 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 GALNT14Q96FL9 552 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 SDHCQ99643 169 aaPredicted RBP7.83□□□□□ -1.16
SNX6-208ENST00000556712 WFDC10AQ9H1F0 79 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 TMEM56-RWDD3S4R434 201 aa7.83□□□□□ -1.16
SNX6-208ENST00000556712 CD7P09564 240 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 SNCAP37840 140 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 CCR6P51684 374 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 CD81P60033 236 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 GUCA2BQ16661 112 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 LYZL2Q7Z4W2 148 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 GTSCR1Q86UQ5 136 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 TMEM61Q8N0U2 210 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 OR2K2Q8NGT1 345 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 SCGB3A2Q96PL1 93 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 C20orf24Q9BUV8 137 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 ENY2Q9NPA8 101 aa7.82□□□□□ -1.16
SNX6-208ENST00000556712 ZNF785A8K8V0 405 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 INS-IGF2F8WCM5 200 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 NDUFA4O00483 81 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 GNG7O60262 68 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
SNX6-208ENST00000556712 CTSGP08311 255 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 VAMP1P23763 118 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 INPP1P49441 399 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 MFAP4P55083 255 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 SPCS3P61009 180 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 ANKRD55Q3KP44 614 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 AARDQ4LEZ3 155 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 NMSQ5H8A3 153 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 SPSB3Q6PJ21 355 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 IL22RA2Q969J5 263 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 FNDC4Q9H6D8 234 aaPredicted RBP7.81□□□□□ -1.16
SNX6-208ENST00000556712 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.81□□□□□ -1.16
SNX6-208ENST00000556712 MRPL36Q9P0J6 103 aaKnown RBP7.81□□□□□ -1.16
SNX6-208ENST00000556712 KCNIP3Q9Y2W7 256 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 UFC1Q9Y3C8 167 aa7.81□□□□□ -1.16
SNX6-208ENST00000556712 IGHV3-49A0A0A0MS15 119 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 A0A0B4J2A0 478 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 CEBPZOSA8MTT3 80 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 NUPL2O15504 423 aaKnown RBP7.8□□□□□ -1.16
SNX6-208ENST00000556712 SULT1A3P0DMM9 295 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 SULT1A4P0DMN0 295 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 ANXA3P12429 323 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 IL7P13232 177 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 OPRK1P41145 380 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 PPP1R1AQ13522 171 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 BSXQ3C1V8 233 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 LGI3Q8N145 548 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 OR52E5Q8NH55 327 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 PALMDQ9NP74 551 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 HEYLQ9NQ87 328 aaPredicted RBP7.8□□□□□ -1.16
SNX6-208ENST00000556712 DAZ1Q9NQZ3 744 aaKnown RBP7.8□□□□□ -1.16
SNX6-208ENST00000556712 C19orf73Q9NVV2 129 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 TECRQ9NZ01 308 aaKnown RBP7.8□□□□□ -1.16
SNX6-208ENST00000556712 NDUFA13Q9P0J0 144 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 SHPKQ9UHJ6 478 aa7.8□□□□□ -1.16
SNX6-208ENST00000556712 YIF1AO95070 293 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 NHLRC4P0CG21 123 aaPredicted RBP7.79□□□□□ -1.16
SNX6-208ENST00000556712 C8orf88P0DMB2 117 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 FCGR2BP31994 310 aaPredicted RBP7.79□□□□□ -1.16
SNX6-208ENST00000556712 BTCP35070 178 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 SUB1P53999 127 aaKnown RBP eCLIP7.79□□□□□ -1.16
SNX6-208ENST00000556712 ELLP55199 621 aaPredicted RBP7.79□□□□□ -1.16
SNX6-208ENST00000556712 RBMS2Q15434 407 aaKnown RBP7.79□□□□□ -1.16
SNX6-208ENST00000556712 MLANAQ16655 118 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 TMEM128Q5BJH2 165 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 PVRIGQ6DKI7 326 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 CENPSQ8N2Z9 138 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 DEFB125Q8N687 156 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 SLC24A4Q8NFF2 622 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 TMEM170AQ8WVE7 144 aa7.79□□□□□ -1.16
SNX6-208ENST00000556712 DEDD2Q8WXF8 326 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms