RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CTSGP08311 255 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 C8orf88P0DMB2 117 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 RNASE2P10153 161 aaKnown RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 CD81P60033 236 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 SUPT4H1P63272 117 aaKnown RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 TMEM187Q14656 261 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 SURF2Q15527 256 aaPredicted RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 MLANAQ16655 118 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 GUCA2BQ16661 112 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 PYDC2Q56P42 97 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 Q56UQ5 140 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 ZNF57Q68EA5 555 aaPredicted RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 PVRIGQ6DKI7 326 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 CCDC190Q86UF4 302 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 SGPP2Q8IWX5 399 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 DEFB125Q8N687 156 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 PINX1Q96BK5 328 aaKnown RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 BSCL2Q96G97 398 aaPredicted RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 WWC2-AS2Q96NR7 200 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 RCHY1Q96PM5 261 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 PRRT1Q99946 306 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 NEURL2Q9BR09 285 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 TM2D3Q9BRN9 247 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 MCUBQ9NWR8 336 aa6.09□□□□□ -1.43
VTI1B-206ENST00000556461 TECRQ9NZ01 308 aaKnown RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 MRPL36Q9P0J6 103 aaKnown RBP6.09□□□□□ -1.43
VTI1B-206ENST00000556461 RBMY1BA6NDE4 496 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 RBMY1EA6NEQ0 496 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 INS-IGF2F8WCM5 200 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 SCAF4O95104 1147 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 NXPH3O95157 252 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 IFNA17P01571 189 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 RBMY1DP0C7P1 496 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 ERHP84090 104 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 DHODHQ02127 395 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 HAGHQ16775 308 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 AARDQ4LEZ3 155 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 TMEM268Q5VZI3 342 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 LINC00322Q6ZN03 302 aaPredicted RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 GTSCR1Q86UQ5 136 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 SLC35G3Q8N808 338 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 OR1L6Q8NGR2 347 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 RNASE11Q8TAA1 199 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 RBPMSQ93062 196 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 RRNAD1Q96FB5 475 aaKnown RBP6.08□□□□□ -1.44
VTI1B-206ENST00000556461 PALMDQ9NP74 551 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 CACNG5Q9UF02 275 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 SCP2D1Q9UJQ7 156 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 UFC1Q9Y3C8 167 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 TMEM56-RWDD3S4R434 201 aa6.08□□□□□ -1.44
VTI1B-206ENST00000556461 IGHV3-49A0A0A0MS15 119 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 OR11H12B2RN74 326 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 ZNF701M0R085 212 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 NDUFA4O00483 81 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 B3GALNT1O75752 331 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 ATG12O94817 140 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 AKR1C4P17516 323 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 FCGR2BP31994 310 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 HOXA1P49639 335 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 MFAP4P55083 255 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 SPSB3Q6PJ21 355 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 LYZL2Q7Z4W2 148 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 TMEM170AQ8WVE7 144 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 GALNT14Q96FL9 552 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 ATP6V0BQ99437 205 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 SDHCQ99643 169 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 C20orf24Q9BUV8 137 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 SRRQ9GZT4 340 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 FNDC4Q9H6D8 234 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 TUBA4BQ9H853 241 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 RETNQ9HD89 108 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 MRPL27Q9P0M9 148 aaKnown RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 DNAH1Q9P2D7 4330 aa6.07□□□□□ -1.44
VTI1B-206ENST00000556461 PLECQ15149 4684 aaKnown RBP6.07□□□□□ -1.44
VTI1B-206ENST00000556461 S100A5P33763 92 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 SNCAP37840 140 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 SPCS3P61009 180 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 BAK1Q16611 211 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 BSXQ3C1V8 233 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 NMSQ5H8A3 153 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 TMED4Q7Z7H5 227 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 FAM219AQ8IW50 185 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 TOMM5Q8N4H5 51 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 MARC2Q969Z3 335 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 CITED4Q96RK1 184 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 PDCD10Q9BUL8 212 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 SRD5A3Q9H8P0 318 aa6.06□□□□□ -1.44
VTI1B-206ENST00000556461 DAZ1Q9NQZ3 744 aaKnown RBP6.06□□□□□ -1.44
VTI1B-206ENST00000556461 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.06□□□□□ -1.44
VTI1B-206ENST00000556461 IGHV3OR16-13A0A075B7E8 117 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 IGHV3-74A0A0B4J1X5 117 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 A0A1B0GU03 582 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 C15orf62A8K5M9 175 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 K7EMT4 169 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 CHEK1O14757 476 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 NUPL2O15504 423 aaKnown RBP6.05□□□□□ -1.44
VTI1B-206ENST00000556461 YIF1AO95070 293 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 TMEM50AO95807 157 aa6.05□□□□□ -1.44
VTI1B-206ENST00000556461 APOHP02749 345 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms