RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 KIAA1456Q9P272 454 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 DPM3Q9P2X0 92 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 ARID1AO14497 2285 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 DOPEY1Q5JWR5 2465 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 IGKV1OR2-108A0A075B7D4 117 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 TIMM23O14925 209 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 SLC25A17O43808 307 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 ZNF25P17030 456 aaPredicted RBP7.11□□□□□ -1.27
TDP1-210ENST00000554976 HTR1DP28221 377 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 OPRK1P41145 380 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 COMPP49747 757 aaPredicted RBP7.11□□□□□ -1.27
TDP1-210ENST00000554976 MFAP2P55001 183 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 LCN2P80188 198 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 PAX8Q06710 450 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 ZNF616Q08AN1 781 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 LFNGQ8NES3 379 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 GGTLC1Q9BX51 225 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 TREM1Q9NP99 234 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 INSIG2Q9Y5U4 225 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 MINOS1-NBL1R4GNA1 71 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 SVEP1Q4LDE5 3571 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 IGHV4-61A0A0C4DH41 118 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 OOSP1A8MZH6 123 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 MPDU1O75352 247 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 TSPAN15O95858 294 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 PRR20EP86478 221 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 PRR20CP86479 221 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 PRR20DP86480 221 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 PRR20BP86481 221 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 PRR20AP86496 221 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 ICAM4Q14773 271 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 GUK1Q16774 197 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 AKR1C8PQ5T2L2 129 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 FLNCQ14315 2725 aa7.11□□□□□ -1.27
TDP1-210ENST00000554976 OPN1MWP04001 364 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 SFTA3P0C7M3 94 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 OPN1MW2P0DN77 364 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 OPN1MW3P0DN78 364 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 RAB11AP62491 216 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 TMEM249Q2WGJ8 235 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 VMA21Q3ZAQ7 101 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 ZNF506Q5JVG8 444 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 RUSC1-AS1Q66K80 236 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 RPEQ96AT9 228 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 TMEM208Q9BTX3 173 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 TBL2Q9Y4P3 447 aaKnown RBP7.1□□□□□ -1.27
TDP1-210ENST00000554976 UTP20O75691 2785 aaKnown RBP7.1□□□□□ -1.27
TDP1-210ENST00000554976 A0A1W2PN81 502 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 EREGO14944 169 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 CIDEAO60543 219 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 PRH1P02810 166 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 CRYGCP07315 174 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 LINC00869P0C866 280 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 CHRNA7P36544 502 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 UBE2E1P51965 193 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 P2RX4Q99571 388 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 RARRES2Q99969 163 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 PRO1933Q9H354 126 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 SMDT1Q9H4I9 107 aa7.1□□□□□ -1.27
TDP1-210ENST00000554976 IGHV4-30-2A0A087WSY4 118 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 LOC102723971A0A1B0GUV8 181 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 ACACBO00763 2458 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 AGPAT2O15120 278 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 SOX15O60248 233 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 SPTA1P02549 2419 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 MOB3BQ86TA1 216 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 PIMREGQ9BSJ6 248 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 NPVFQ9HCQ7 196 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 IGKV1D-37A0A075B6S9 117 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 PSMB11A5LHX3 300 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 SNRPCP09234 159 aaKnown RBP7.09□□□□□ -1.27
TDP1-210ENST00000554976 CD69Q07108 199 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 PPP1R27Q86WC6 154 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 MMD2Q8IY49 270 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 OR10D4PQ8NGN7 298 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 FAM168AQ92567 244 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 NRGNQ92686 78 aa7.09□□□□□ -1.27
TDP1-210ENST00000554976 FNDC4Q9H6D8 234 aaPredicted RBP7.09□□□□□ -1.27
TDP1-210ENST00000554976 RBFOX3A6NFN3 312 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 FCN1O00602 326 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 FOXH1O75593 365 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 TOX4O94842 621 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 RPL29P47914 159 aaKnown RBP7.09□□□□□ -1.28
TDP1-210ENST00000554976 FFAR4Q5NUL3 377 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 OR10G4Q8NGN3 311 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 SRSF8Q9BRL6 282 aaKnown RBP7.09□□□□□ -1.28
TDP1-210ENST00000554976 ATG101Q9BSB4 218 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 COMMD5Q9GZQ3 224 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 SLC45A2Q9UMX9 530 aa7.09□□□□□ -1.28
TDP1-210ENST00000554976 USP9XQ93008 2570 aaPredicted RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 ELOA3CA0A087WX78 387 aaPredicted RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 HSBP1L1C9JCN9 74 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 C17orf112F2Z3M2 114 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 M0QZK8 103 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 SRP19P09132 144 aaKnown RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 NPSP0C0P6 89 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 CEACAM3P40198 252 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 RBX1P62877 108 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms