RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 TRBV12-3P01733 135 aa16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 HTR2BP41595 481 aa16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 SUB1P53999 127 aaKnown RBP eCLIP16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 C11orf87Q6NUJ2 197 aa16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 UXS1Q8NBZ7 420 aa16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 OR4D5Q8NGN0 318 aa16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 OR10C1Q96KK4 312 aa16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 HIPK2Q9H2X6 1198 aa16.51■□□□□ 0.23
SDR39U1-208ENST00000554698 TRBV7-1A0A0A6YYK4 115 aa16.5■□□□□ 0.23
SDR39U1-208ENST00000554698 ID3Q02535 119 aa16.5■□□□□ 0.23
SDR39U1-208ENST00000554698 IAH1Q2TAA2 248 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-208ENST00000554698 ZNF502Q8TBZ5 544 aa16.5■□□□□ 0.23
SDR39U1-208ENST00000554698 S4R3C0 116 aa16.5■□□□□ 0.23
SDR39U1-208ENST00000554698 I3L2K1 104 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 CCSO14618 274 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 MED6O75586 246 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 IGHV3-23P01764 117 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 C2orf83Q53S99 150 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 SLC24A4Q8NFF2 622 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 SCARB1Q8WTV0 552 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 MISP3Q96FF7 219 aa16.49■□□□□ 0.23
SDR39U1-208ENST00000554698 BMPR1BO00238 502 aa16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 CD33P20138 364 aa16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 ZP3P21754 424 aa16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 HOXD3P31249 432 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 ZBTB8BQ8NAP8 495 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 TMEM170AQ8WVE7 144 aa16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 U3KQ87 197 aa16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 NBEAL1Q6ZS30 2694 aa16.48■□□□□ 0.23
SDR39U1-208ENST00000554698 CORTO00230 105 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 SYNGR2O43760 224 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 SLURP1P55000 103 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 RGS21Q2M5E4 152 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 CLEC19AQ6UXS0 136 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 ATP6V0BQ99437 205 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 MAGT1Q9H0U3 335 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 C21orf62Q9NYP8 219 aa16.47■□□□□ 0.23
SDR39U1-208ENST00000554698 IGHV3-21A0A0B4J1V1 117 aa16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 C7orf66A4D0T2 115 aa16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 MT-CO2P00403 227 aa16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 CLEC3BP05452 202 aa16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 NPY1RP25929 384 aa16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 NKX2-1P43699 371 aaPredicted RBP16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 ATP5IP56385 69 aaPredicted RBP16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 TATDN3Q17R31 274 aa16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 DLX4Q92988 240 aaPredicted RBP16.46■□□□□ 0.23
SDR39U1-208ENST00000554698 PPP5D1E7EU14 171 aa16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 F8W735 103 aaPredicted RBP16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 KLF5Q13887 457 aaPredicted RBP16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 NOXA1Q86UR1 476 aa16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 DCUN1D4Q92564 292 aa16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 PINX1Q96BK5 328 aaKnown RBP16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 RCC1LQ96I51 464 aaKnown RBP16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 CIB3Q96Q77 187 aaPredicted RBP16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 GSKIPQ9P0R6 139 aa16.45■□□□□ 0.22
SDR39U1-208ENST00000554698 C5orf51A6NDU8 294 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 FAM25EA8MYX2 175 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 LY86O95711 162 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 IFNA10P01566 189 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 IAPPP10997 89 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 FCGR2BP31994 310 aaPredicted RBP16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 GPR183P32249 361 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 ARL3P36405 182 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 POLR2GP62487 172 aaKnown RBP eCLIP16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 RNASEH2CQ8TDP1 164 aaKnown RBP16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 C2orf50Q96LR7 162 aa16.44■□□□□ 0.22
SDR39U1-208ENST00000554698 GGCTO75223 188 aaKnown RBP16.43■□□□□ 0.22
SDR39U1-208ENST00000554698 RPEL1Q2QD12 228 aa16.43■□□□□ 0.22
SDR39U1-208ENST00000554698 GSG1LQ6UXU4 331 aa16.43■□□□□ 0.22
SDR39U1-208ENST00000554698 TXN2Q99757 166 aa16.43■□□□□ 0.22
SDR39U1-208ENST00000554698 FNDC4Q9H6D8 234 aaPredicted RBP16.43■□□□□ 0.22
SDR39U1-208ENST00000554698 NOTCH3Q9UM47 2321 aa16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 WRBO00258 174 aa16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 MBPP02686 304 aaPredicted RBP16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 MFAP4P55083 255 aa16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 IL15RAQ13261 267 aa16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 OXA1LQ15070 435 aa16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 BSCL2Q96G97 398 aaPredicted RBP16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 MCRIP2Q9BUT9 160 aaKnown RBP16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 FBN3Q75N90 2809 aa16.42■□□□□ 0.22
SDR39U1-208ENST00000554698 OR2T8A6NH00 312 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 C15orf62A8K5M9 175 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 OVOL1O14753 267 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 TGOLN2O43493 480 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 IGHV3-48P01763 117 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 IGLL1P15814 213 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 OPRK1P41145 380 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 SPSB3Q6PJ21 355 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 GAR1Q9NY12 217 aaKnown RBP16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 RCL1Q9Y2P8 373 aaKnown RBP16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 ALG5Q9Y673 324 aa16.41■□□□□ 0.22
SDR39U1-208ENST00000554698 NOTCH1P46531 2555 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 GOSR2O14653 212 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 SSNA1O43805 119 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 SSSCA1O60232 199 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 OR2C1O95371 312 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 TMEM50AO95807 157 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 SCGB1D2O95969 90 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 Q56UQ5 140 aa16.4■□□□□ 0.22
SDR39U1-208ENST00000554698 GPHB5Q86YW7 130 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms