RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 INPP1P49441 399 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 MFAP4P55083 255 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 CD81P60033 236 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 DEFB114Q30KQ6 69 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 ZNF57Q68EA5 555 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-213ENST00000554600 SPSB3Q6PJ21 355 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 UNQ9165/PRO28630Q6UXU0 137 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 TMED4Q7Z7H5 227 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 SBSPONQ8IVN8 264 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 SELENOHQ8IZQ5 122 aaKnown RBP8.07□□□□□ -1.12
SHMT2-213ENST00000554600 Q8N1Y9 231 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 LHFPL5Q8TAF8 219 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 CHRDL1Q9BU40 450 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-213ENST00000554600 GAR1Q9NY12 217 aaKnown RBP8.07□□□□□ -1.12
SHMT2-213ENST00000554600 SLC2A8Q9NY64 477 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 TECRQ9NZ01 308 aaKnown RBP8.07□□□□□ -1.12
SHMT2-213ENST00000554600 IGHV3OR16-8A0A075B7F1 116 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 NUPL2O15504 423 aaKnown RBP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 ZNF207O43670 478 aaKnown RBP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 GNG7O60262 68 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 YIF1AO95070 293 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 SCAF4O95104 1147 aaKnown RBP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 SUB1P53999 127 aaKnown RBP eCLIP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 KLF9Q13886 244 aaPredicted RBP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 ZNF79Q15937 498 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 BTNL8Q6UX41 500 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 RBPMS2Q6ZRY4 209 aaKnown RBP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 FAM219AQ8IW50 185 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 ZNF114Q8NC26 417 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 TRIM63Q969Q1 353 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 MARC2Q969Z3 335 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 WDR89Q96FK6 387 aaPredicted RBP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 ZMAT4Q9H898 229 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 HEYLQ9NQ87 328 aaPredicted RBP8.06□□□□□ -1.12
SHMT2-213ENST00000554600 PRR13Q9NZ81 148 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 CACNG5Q9UF02 275 aa8.06□□□□□ -1.12
SHMT2-213ENST00000554600 ZNF785A8K8V0 405 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 CEBPZOSA8MTT3 80 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 I3L2K1 104 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 NXPH3O95157 252 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 ANXA3P12429 323 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 ADMP35318 185 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 ELLP55199 621 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-213ENST00000554600 SPCS3P61009 180 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 TRIQKQ629K1 86 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 Q6ZRM9 215 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 TMEM61Q8N0U2 210 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 TMEM190Q8WZ59 177 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 TMEM230Q96A57 120 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 GPR146Q96CH1 333 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 WWC2-AS2Q96NR7 200 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 ATP6V0BQ99437 205 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 NEURL2Q9BR09 285 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 ZNF436Q9C0F3 470 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-213ENST00000554600 MRPL27Q9P0M9 148 aaKnown RBP8.05□□□□□ -1.12
SHMT2-213ENST00000554600 MLXQ9UH92 298 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 DNAH9Q9NYC9 4486 aa8.05□□□□□ -1.12
SHMT2-213ENST00000554600 LINC00854A0A1B0GVQ3 168 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 NDUFA4O00483 81 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 CD7P09564 240 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 SULT1A3P0DMM9 295 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 SULT1A4P0DMN0 295 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 RNASE2P10153 161 aaKnown RBP8.04□□□□□ -1.12
SHMT2-213ENST00000554600 VAMP1P23763 118 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 RELQ04864 619 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-213ENST00000554600 TMEM187Q14656 261 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 SLC16A13Q7RTY0 426 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 DUSP18Q8NEJ0 188 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 OR52B4Q8NGK2 314 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 DEDD2Q8WXF8 326 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 RCHY1Q96PM5 261 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 TXN2Q99757 166 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 SRRQ9GZT4 340 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 DAZ1Q9NQZ3 744 aaKnown RBP8.04□□□□□ -1.12
SHMT2-213ENST00000554600 TMEM56-RWDD3S4R434 201 aa8.04□□□□□ -1.12
SHMT2-213ENST00000554600 OR11H12B2RN74 326 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
SHMT2-213ENST00000554600 CORTO00230 105 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 CTSGP08311 255 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 OPRK1P41145 380 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 NPBWR1P48145 328 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 SRPXP78539 464 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 ANKRD55Q3KP44 614 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 LGI3Q8N145 548 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 DEFB125Q8N687 156 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 IL22RA2Q969J5 263 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 GALNT14Q96FL9 552 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 WFDC10AQ9H1F0 79 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 BATF3Q9NR55 127 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 C19orf73Q9NVV2 129 aa8.03□□□□□ -1.12
SHMT2-213ENST00000554600 IGHV3-49A0A0A0MS15 119 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 A0A0B4J2A0 478 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 C8orf88P0DMB2 117 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 FCGR2BP31994 310 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-213ENST00000554600 HTR2BP41595 481 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 SUPT4H1P63272 117 aaKnown RBP8.02□□□□□ -1.13
SHMT2-213ENST00000554600 TMEM128Q5BJH2 165 aa8.02□□□□□ -1.13
SHMT2-213ENST00000554600 LAMTOR1Q6IAA8 161 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms