RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZNF664Q8N3J9 261 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 CORO2AQ92828 525 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 EAF1Q96JC9 268 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 CBY1Q9Y3M2 126 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 HELTA6NFD8 242 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 REG1AP05451 166 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 RNASE2P10153 161 aaKnown RBP12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 CD33P20138 364 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 GNG4P50150 75 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 PDLIM4P50479 330 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 TCL1AP56279 114 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 POU2AF1Q16633 256 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 C3orf36Q3SXR2 165 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 TEX36Q5VZQ5 186 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 NHLRC2Q8NBF2 726 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 RNASE7Q9H1E1 156 aaKnown RBP12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 IGHV3-72A0A0B4J1Y9 119 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 IER3P46695 156 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 MORN5Q5VZ52 161 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 IGF2-ASQ6U949 168 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 RNASEH2CQ8TDP1 164 aaKnown RBP12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
ARHGEF40-203ENST00000554514 H0YJW9 148 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 MGST1P10620 155 aaKnown RBP12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 FLYWCH2Q96CP2 140 aaKnown RBP12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 TECRQ9NZ01 308 aaKnown RBP12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 ZNF257Q9Y2Q1 563 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 PPIAL4EA0A075B759 164 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 PPIAL4DF5H284 164 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 PPIAL4FP0DN26 164 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 RPL8P62917 257 aaKnown RBP12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 KRTCAP3Q53RY4 240 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 LHFPL4Q7Z7J7 247 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 OR8I2Q8N0Y5 310 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 OR1L6Q8NGR2 347 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 IL36BQ9NZH7 164 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 PPIAL4AQ9Y536 164 aa12.74□□□□□ -0.37
ARHGEF40-203ENST00000554514 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 ZNF833PQ6ZTB9 187 aa12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 NUP37Q8NFH4 326 aa12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 SVIPQ8NHG7 77 aa12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 THBDP07204 575 aa12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 MRPL18Q9H0U6 180 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 BET1LQ9NYM9 111 aa12.73□□□□□ -0.37
ARHGEF40-203ENST00000554514 MKRN2OSH3BPM6 223 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 FCN1O00602 326 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 PLAUP00749 431 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 ERHP84090 104 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 CD69Q07108 199 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 MMD2Q8IY49 270 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 OR5B3Q8NH48 314 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 SLC35E1Q96K37 410 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 TMEM167BQ9NRX6 74 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 SERTAD4Q9NUC0 356 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 FKBP11Q9NYL4 201 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 RELNP78509 3460 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 CEP295Q9C0D2 2601 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 NDUFB3O43676 98 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 RPEL1Q2QD12 228 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 PRR30Q53SZ7 412 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 TPSG1Q9NRR2 321 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 GCGP01275 180 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 SSX2Q16385 188 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 OR1L8Q8NGR8 309 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 RITA1Q96K30 269 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 LINC00479Q96M42 142 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 DYNLRB1Q9NP97 96 aa12.72□□□□□ -0.37
ARHGEF40-203ENST00000554514 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 SNURFLB1AK76 121 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 TMEM178BH3BS89 294 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 SLC25A17O43808 307 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 PYYP10082 97 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 RAB4BP61018 213 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 UBE2L3P68036 154 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 REC114Q7Z4M0 266 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 OSR1Q8TAX0 266 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 C11orf52Q96A22 123 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 NDUFA4L2Q9NRX3 87 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 TACC2O95359 2948 aa12.71□□□□□ -0.37
ARHGEF40-203ENST00000554514 F2Z2F3 143 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 AREGP15514 252 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 WT1-ASQ06250 92 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 USF2Q15853 346 aaPredicted RBP12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 C19orf35Q6ZS72 473 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 CMTM2Q8TAZ6 248 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 NPIPB3Q92617 1050 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 BTF3L4Q96K17 158 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 MS4A10Q96PG2 267 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 TMEM106BQ9NUM4 274 aa12.71□□□□□ -0.38
ARHGEF40-203ENST00000554514 ABCA1O95477 2261 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 DLL1O00548 723 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 TAS2R45P59539 299 aa12.7□□□□□ -0.38
ARHGEF40-203ENST00000554514 TCF15Q12870 199 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms