RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CDS2O95674 445 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 H2AFB2P0C5Z0 115 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 ANXA7P20073 488 aaKnown RBP6.6□□□□□ -1.35
ACTN1-213ENST00000554508 CBLN1P23435 193 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 ELLP55199 621 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-213ENST00000554508 SUPT4H1P63272 117 aaKnown RBP6.6□□□□□ -1.35
ACTN1-213ENST00000554508 WT1-ASQ06250 92 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 PPP1R1AQ13522 171 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 TMEM187Q14656 261 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 CD300EQ496F6 205 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-213ENST00000554508 TMEM268Q5VZI3 342 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 PLET1Q6UQ28 207 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 NRARPQ7Z6K4 114 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 SELENOHQ8IZQ5 122 aaKnown RBP6.6□□□□□ -1.35
ACTN1-213ENST00000554508 OR4A16Q8NH70 328 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 ZNF502Q8TBZ5 544 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 MARC2Q969Z3 335 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 RRNAD1Q96FB5 475 aaKnown RBP6.6□□□□□ -1.35
ACTN1-213ENST00000554508 GALNT14Q96FL9 552 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 RCHY1Q96PM5 261 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 TM2D3Q9BRN9 247 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 HINT2Q9BX68 163 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 TUBA4BQ9H853 241 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 PALMDQ9NP74 551 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 TMEM14BQ9NUH8 114 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 NSG2Q9Y328 171 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 S4R3C0 116 aa6.6□□□□□ -1.35
ACTN1-213ENST00000554508 ZNF320A2RRD8 509 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 ZNF785A8K8V0 405 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 C3orf84H3BNL1 204 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 TGOLN2O43493 480 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 SFT2D2O95562 160 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 IGKV1-5P01602 117 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 OR4E1P0C645 316 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 GPR183P32249 361 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 UBE2MP61081 183 aaKnown RBP6.59□□□□□ -1.35
ACTN1-213ENST00000554508 SRPXP78539 464 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 SPSB3Q6PJ21 355 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 LGI3Q8N145 548 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 OR1P1Q8NH06 330 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 LHFPL5Q8TAF8 219 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 RBPMSQ93062 196 aaKnown RBP6.59□□□□□ -1.35
ACTN1-213ENST00000554508 BSCL2Q96G97 398 aaPredicted RBP6.59□□□□□ -1.35
ACTN1-213ENST00000554508 NEURL2Q9BR09 285 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 ZC4H2Q9NQZ6 224 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 GAR1Q9NY12 217 aaKnown RBP6.59□□□□□ -1.35
ACTN1-213ENST00000554508 MRPL27Q9P0M9 148 aaKnown RBP6.59□□□□□ -1.35
ACTN1-213ENST00000554508 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 TMEM56-RWDD3S4R434 201 aa6.59□□□□□ -1.35
ACTN1-213ENST00000554508 TRAV25A0A0B4J276 109 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 PIGBOS1A0A0B4J2F0 54 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 TMEM213A2RRL7 107 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 C9orf170A2RU37 121 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 C8orf88P0DMB2 117 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 MFAP2P55001 183 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 CD81P60033 236 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 HSPE1P61604 102 aaKnown RBP6.58□□□□□ -1.36
ACTN1-213ENST00000554508 ERHP84090 104 aaKnown RBP6.58□□□□□ -1.36
ACTN1-213ENST00000554508 PRCDQ00LT1 54 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 DHRS2Q13268 280 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 GUCA2BQ16661 112 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 IZUMO4Q1ZYL8 232 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 ANKRD55Q3KP44 614 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 LYZL2Q7Z4W2 148 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 LYG2Q86SG7 212 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 OR2C3Q8N628 320 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 SLC35G3Q8N808 338 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 UXS1Q8NBZ7 420 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 COQ8AQ8NI60 647 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 IL22RA2Q969J5 263 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 TXN2Q99757 166 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 SPATA25Q9BR10 227 aa6.58□□□□□ -1.36
ACTN1-213ENST00000554508 ZNF436Q9C0F3 470 aaPredicted RBP6.58□□□□□ -1.36
ACTN1-213ENST00000554508 A0A0B4J2A0 478 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 A0A0G2JRQ6 117 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 OR2T8A6NH00 312 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 DBX1A6NMT0 343 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 K7EIM0 57 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 NDUFA4O00483 81 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 EDN2P20800 178 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 FCGR2BP31994 310 aaPredicted RBP6.57□□□□□ -1.36
ACTN1-213ENST00000554508 HAGHQ16775 308 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 TM4SF20Q53R12 229 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 SLC16A13Q7RTY0 426 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 FAM219AQ8IW50 185 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 ZNF114Q8NC26 417 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 DUSP18Q8NEJ0 188 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 OR52B4Q8NGK2 314 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 SCARB1Q8WTV0 552 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 GPR146Q96CH1 333 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 CITED4Q96RK1 184 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 SEC22CQ9BRL7 303 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 PDCD10Q9BUL8 212 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 C21orf62Q9NYP8 219 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 MLXQ9UH92 298 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 SHPKQ9UHJ6 478 aa6.57□□□□□ -1.36
ACTN1-213ENST00000554508 IGHV3-21A0A0B4J1V1 117 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 A0A0B4J293 547 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 DUXBA0A1W2PPF3 345 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 OR11H12B2RN74 326 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms