RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 IGHV3-23P01764 117 aa10.69□□□□□ -0.7
TUBB3-202ENST00000553656 IAH1Q2TAA2 248 aaPredicted RBP10.69□□□□□ -0.7
TUBB3-202ENST00000553656 PINX1Q96BK5 328 aaKnown RBP10.69□□□□□ -0.7
TUBB3-202ENST00000553656 RBKSQ9H477 322 aa10.69□□□□□ -0.7
TUBB3-202ENST00000553656 DMRT1Q9Y5R6 373 aa10.69□□□□□ -0.7
TUBB3-202ENST00000553656 S4R3C0 116 aa10.69□□□□□ -0.7
TUBB3-202ENST00000553656 MPTX1A8MV57 137 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 IFNA10P01566 189 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
TUBB3-202ENST00000553656 NPY1RP25929 384 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 NKX2-1P43699 371 aaPredicted RBP10.68□□□□□ -0.7
TUBB3-202ENST00000553656 MFAP2P55001 183 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 RGS21Q2M5E4 152 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 RPEL1Q2QD12 228 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 CLEC19AQ6UXS0 136 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 CIB3Q96Q77 187 aaPredicted RBP10.68□□□□□ -0.7
TUBB3-202ENST00000553656 MCRIP2Q9BUT9 160 aaKnown RBP10.68□□□□□ -0.7
TUBB3-202ENST00000553656 GAR1Q9NY12 217 aaKnown RBP10.68□□□□□ -0.7
TUBB3-202ENST00000553656 C21orf62Q9NYP8 219 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 GSKIPQ9P0R6 139 aa10.68□□□□□ -0.7
TUBB3-202ENST00000553656 IGHV3-21A0A0B4J1V1 117 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 RPS10-NUDT3A0A1W2PQS6 291 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 CCSO14618 274 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 SYNGR2O43760 224 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 LY86O95711 162 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 SCGB1D2O95969 90 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 MT-CO2P00403 227 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 TRBV12-3P01733 135 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 SPNP16150 400 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
TUBB3-202ENST00000553656 GPR183P32249 361 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 ARL3P36405 182 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 OPRK1P41145 380 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 SLURP1P55000 103 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 RPP30P78346 268 aaKnown RBP10.67□□□□□ -0.7
TUBB3-202ENST00000553656 TATDN3Q17R31 274 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 Q56UQ5 140 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 GSG1LQ6UXU4 331 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 UBAC2Q8NBM4 344 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 WFDC9Q8NEX5 89 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 RCC1LQ96I51 464 aaKnown RBP10.67□□□□□ -0.7
TUBB3-202ENST00000553656 CCDC140Q96MF4 163 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 GPR61Q9BZJ8 451 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 MAGT1Q9H0U3 335 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 U3KQ87 197 aa10.67□□□□□ -0.7
TUBB3-202ENST00000553656 K7EIM0 57 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 OVOL1O14753 267 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 SSNA1O43805 119 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
TUBB3-202ENST00000553656 IAPPP10997 89 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 ATP5IP56385 69 aaPredicted RBP10.66□□□□□ -0.7
TUBB3-202ENST00000553656 BSXQ3C1V8 233 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 C2orf83Q53S99 150 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 ZBTB8BQ8NAP8 495 aaPredicted RBP10.66□□□□□ -0.7
TUBB3-202ENST00000553656 OR4D5Q8NGN0 318 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 ZNF502Q8TBZ5 544 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 RNASEH2CQ8TDP1 164 aaKnown RBP10.66□□□□□ -0.7
TUBB3-202ENST00000553656 SCARB1Q8WTV0 552 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 DCUN1D4Q92564 292 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 PAIP2BQ9ULR5 123 aaKnown RBP10.66□□□□□ -0.7
TUBB3-202ENST00000553656 WNK1Q9H4A3 2382 aa10.66□□□□□ -0.7
TUBB3-202ENST00000553656 PPP5D1E7EU14 171 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 I3L2K1 104 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 BMPR1BO00238 502 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 SCGB2A1O75556 95 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 IFNA4P05014 189 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 CLEC3BP05452 202 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 MFAP4P55083 255 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 RAB11AP62491 216 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 ID3Q02535 119 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 ACSM6Q6P461 480 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 DLX4Q92988 240 aaPredicted RBP10.65□□□□□ -0.7
TUBB3-202ENST00000553656 BSCL2Q96G97 398 aaPredicted RBP10.65□□□□□ -0.7
TUBB3-202ENST00000553656 C2orf50Q96LR7 162 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 ATP6V0BQ99437 205 aa10.65□□□□□ -0.7
TUBB3-202ENST00000553656 OR2T8A6NH00 312 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 SEC14L6B5MCN3 397 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 GOSR2O14653 212 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
TUBB3-202ENST00000553656 SSSCA1O60232 199 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 GNG7O60262 68 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 IGLL1P15814 213 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 NPBWR1P48145 328 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 POLR2GP62487 172 aaKnown RBP eCLIP10.64□□□□□ -0.71
TUBB3-202ENST00000553656 PVRIGQ6DKI7 326 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 C11orf87Q6NUJ2 197 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 SPSB3Q6PJ21 355 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 C1QL4Q86Z23 238 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 TXN2Q99757 166 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 ELOVL1Q9BW60 279 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 ZC4H2Q9NQZ6 224 aa10.64□□□□□ -0.71
TUBB3-202ENST00000553656 TGOLN2O43493 480 aa10.63□□□□□ -0.71
TUBB3-202ENST00000553656 IGHV3-48P01763 117 aa10.63□□□□□ -0.71
TUBB3-202ENST00000553656 FAM106AQ4KMX7 169 aa10.63□□□□□ -0.71
TUBB3-202ENST00000553656 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
TUBB3-202ENST00000553656 RAB40CQ96S21 281 aa10.63□□□□□ -0.71
TUBB3-202ENST00000553656 PEMTQ9UBM1 199 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms