RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 AP3S2P59780 193 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 KLF9Q13886 244 aaPredicted RBP11.92□□□□□ -0.5
CDK4-215ENST00000553237 TRIM16LQ309B1 348 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 Q56UQ5 140 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 SLC16A13Q7RTY0 426 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 TOMM5Q8N4H5 51 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 OR52B4Q8NGK2 314 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 BSCL2Q96G97 398 aaPredicted RBP11.92□□□□□ -0.5
CDK4-215ENST00000553237 FAM110AQ9BQ89 295 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 HIPK2Q9H2X6 1198 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
CDK4-215ENST00000553237 RYR3Q15413 4870 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 TEX13DA0A0J9YY54 714 aaPredicted RBP11.91□□□□□ -0.5
CDK4-215ENST00000553237 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
CDK4-215ENST00000553237 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
CDK4-215ENST00000553237 ELLP55199 621 aaPredicted RBP11.91□□□□□ -0.5
CDK4-215ENST00000553237 SPINK9Q5DT21 86 aa11.91□□□□□ -0.5
CDK4-215ENST00000553237 RBPMS2Q6ZRY4 209 aaKnown RBP11.91□□□□□ -0.5
CDK4-215ENST00000553237 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
CDK4-215ENST00000553237 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
CDK4-215ENST00000553237 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
CDK4-215ENST00000553237 MISP3Q96FF7 219 aa11.91□□□□□ -0.5
CDK4-215ENST00000553237 C20orf24Q9BUV8 137 aa11.91□□□□□ -0.5
CDK4-215ENST00000553237 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
CDK4-215ENST00000553237 B3GALNT1O75752 331 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 IGKV1-5P01602 117 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 OR5AC1P0C628 307 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 UCP1P25874 307 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 ADMP35318 185 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 FAUP35544 74 aaKnown RBP11.9□□□□□ -0.5
CDK4-215ENST00000553237 AKR1C2P52895 323 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 OR2C3Q8N628 320 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 SCGB3A2Q96PL1 93 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 SRRQ9GZT4 340 aa11.9□□□□□ -0.5
CDK4-215ENST00000553237 CRYM-AS1A6NIL9 109 aa11.89□□□□□ -0.51
CDK4-215ENST00000553237 ATG12O94817 140 aa11.89□□□□□ -0.51
CDK4-215ENST00000553237 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
CDK4-215ENST00000553237 HSPE1P61604 102 aaKnown RBP11.89□□□□□ -0.51
CDK4-215ENST00000553237 PRCDQ00LT1 54 aa11.89□□□□□ -0.51
CDK4-215ENST00000553237 ANKRD55Q3KP44 614 aa11.89□□□□□ -0.51
CDK4-215ENST00000553237 GLYATL2Q8WU03 294 aa11.89□□□□□ -0.51
CDK4-215ENST00000553237 TMEM222Q9H0R3 208 aa11.89□□□□□ -0.51
CDK4-215ENST00000553237 GAR1Q9NY12 217 aaKnown RBP11.89□□□□□ -0.51
CDK4-215ENST00000553237 TRAV25A0A0B4J276 109 aa11.88□□□□□ -0.51
CDK4-215ENST00000553237 A0A0B4J293 547 aa11.88□□□□□ -0.51
CDK4-215ENST00000553237 I3L2K1 104 aa11.88□□□□□ -0.51
CDK4-215ENST00000553237 NDUFA4O00483 81 aa11.88□□□□□ -0.51
CDK4-215ENST00000553237 CTSGP08311 255 aa11.88□□□□□ -0.51
CDK4-215ENST00000553237 P0C879 139 aa11.88□□□□□ -0.51
CDK4-215ENST00000553237 ERHP84090 104 aaKnown RBP11.88□□□□□ -0.51
CDK4-215ENST00000553237 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
CDK4-215ENST00000553237 RRNAD1Q96FB5 475 aaKnown RBP11.88□□□□□ -0.51
CDK4-215ENST00000553237 ATP6V0BQ99437 205 aa11.88□□□□□ -0.51
CDK4-215ENST00000553237 DAZ1Q9NQZ3 744 aaKnown RBP11.88□□□□□ -0.51
CDK4-215ENST00000553237 NUPL2O15504 423 aaKnown RBP11.87□□□□□ -0.51
CDK4-215ENST00000553237 CDS2O95674 445 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 MT-CO2P00403 227 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 MFAP4P55083 255 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 DHODHQ02127 395 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 BAK1Q16611 211 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 RNASE11Q8TAA1 199 aaKnown RBP11.87□□□□□ -0.51
CDK4-215ENST00000553237 LHFPL5Q8TAF8 219 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 TMEM230Q96A57 120 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 UBQLN2Q9UHD9 624 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 TENM2Q9NT68 2774 aa11.87□□□□□ -0.51
CDK4-215ENST00000553237 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 A0A0G2JRQ6 117 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 ST8SIA3O43173 380 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 YIF1AO95070 293 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 IFNA17P01571 189 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 AKR1C4P17516 323 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 SELENOHQ8IZQ5 122 aaKnown RBP11.86□□□□□ -0.51
CDK4-215ENST00000553237 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 DEDD2Q8WXF8 326 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 RBPMSQ93062 196 aaKnown RBP11.86□□□□□ -0.51
CDK4-215ENST00000553237 ZNF414Q96IQ9 312 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 KCNIP3Q9Y2W7 256 aa11.86□□□□□ -0.51
CDK4-215ENST00000553237 K7EMT4 169 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 TSPAN4O14817 238 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 INPP1P49441 399 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 RELQ04864 619 aaPredicted RBP11.85□□□□□ -0.51
CDK4-215ENST00000553237 TMEM268Q5VZI3 342 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 TRIQKQ629K1 86 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 LAMTOR1Q6IAA8 161 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 Q6ZRM9 215 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 SLC35G3Q8N808 338 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 GALNT14Q96FL9 552 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 SDHCQ99643 169 aaPredicted RBP11.85□□□□□ -0.51
CDK4-215ENST00000553237 SPAG8Q99932 426 aaPredicted RBP11.85□□□□□ -0.51
CDK4-215ENST00000553237 GGTLC1Q9BX51 225 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 PRR13Q9NZ81 148 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 TMEM56-RWDD3S4R434 201 aa11.85□□□□□ -0.51
CDK4-215ENST00000553237 LOC102724200A0A096LPH7 203 aaPredicted RBP11.84□□□□□ -0.51
CDK4-215ENST00000553237 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
CDK4-215ENST00000553237 SNCAP37840 140 aa11.84□□□□□ -0.51
CDK4-215ENST00000553237 TMEM187Q14656 261 aa11.84□□□□□ -0.51
CDK4-215ENST00000553237 TMED4Q7Z7H5 227 aa11.84□□□□□ -0.51
CDK4-215ENST00000553237 FAM219AQ8IW50 185 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms