RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 PVRIGQ6DKI7 326 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 GLDNQ6ZMI3 551 aaPredicted RBP7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 KCTD9Q7L273 389 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 DUSP18Q8NEJ0 188 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 GRPEL2Q8TAA5 225 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 TCTEX1D2Q8WW35 142 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 C5orf30Q96GV9 206 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 C5orf66Q9H5L9 145 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 PRELID3BQ9Y3B1 194 aa7.41□□□□□ -1.22
SLC48A1-209ENST00000552003 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 TRAV6A0A075B6T7 132 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 TEX13DA0A0J9YY54 714 aaPredicted RBP7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 TMEM213A2RRL7 107 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 C11orf94C9JXX5 98 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 PPP5D1E7EU14 171 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 MPPED1O15442 326 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 TNFSF12O43508 249 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 PGLYRP1O75594 196 aaPredicted RBP7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 H2AFB2P0C5Z0 115 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 MC5RP33032 325 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 DUTP33316 252 aaKnown RBP7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 PJVKQ0ZLH3 352 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 EIF4EBP1Q13541 118 aaPredicted RBP7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 PSG5Q15238 335 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 RTL8BQ17RB0 113 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 TRIM16LQ309B1 348 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 TBC1D26Q86UD7 250 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 SLC25A42Q86VD7 318 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 PDPNQ86YL7 162 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 OR11H2Q8NH07 326 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 OR51H1Q8NH63 302 aa7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 RTBDNQ9BSG5 229 aaPredicted RBP7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 FAM212BQ9NTI7 297 aaPredicted RBP7.4□□□□□ -1.22
SLC48A1-209ENST00000552003 PIGBOS1A0A0B4J2F0 54 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 CRYM-AS1A6NIL9 109 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 LINC00473A8K010 186 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 H7C2Y5 167 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 RBFOX2O43251 390 aaKnown RBP eCLIP7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 PROP1O75360 226 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 P0DMU3 169 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 FAM231AP0DMU4 169 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 FAM231CP0DMU5 169 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 CT45A6P0DMU7 189 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 CT45A5P0DMU8 189 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 CT45A7P0DMV0 189 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 ANXA3P12429 323 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 AKR1C4P17516 323 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 F2RP25116 425 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 HLA-DMBP28068 263 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 FXYD3Q14802 87 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 PLGLAQ15195 96 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 ZNF124Q15973 351 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 TMEM128Q5BJH2 165 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 BTNL8Q6UX41 500 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 DRAXINQ8NBI3 349 aaPredicted RBP7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 ADAD2Q8NCV1 583 aaKnown RBP7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 OR4S2Q8NH73 311 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 CD300LFQ8TDQ1 290 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 TMEM230Q96A57 120 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 MARVELD1Q9BSK0 173 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 RNF126Q9BV68 326 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 NAA60Q9H7X0 242 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 SLC35D1Q9NTN3 355 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 METTL1Q9UBP6 276 aaKnown RBP7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 FLVCR2Q9UPI3 526 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 KCNIP3Q9Y2W7 256 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 WASHC3Q9Y3C0 194 aa7.39□□□□□ -1.23
SLC48A1-209ENST00000552003 C3orf85A0A1B0GTC6 90 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 INMT-MINDY4F8WBC2 141 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 H0YJW9 148 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 PRAF2O60831 178 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 FCGR3BO75015 233 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 OR2C1O95371 312 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 DHFRP00374 187 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 PRH1P02810 166 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 SERPINE2P07093 398 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 APELAP0DMC3 54 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 ANXA7P20073 488 aaKnown RBP7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 RPL30P62888 115 aaKnown RBP7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 SRPXP78539 464 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 DHODHQ02127 395 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 OXA1LQ15070 435 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 SPAG16Q8N0X2 631 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 ZNF383Q8NA42 475 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 UXS1Q8NBZ7 420 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 OR5AN1Q8NGI8 311 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 USMG5Q96IX5 58 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 GPHA2Q96T91 129 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 CHRDL1Q9BU40 450 aa7.38□□□□□ -1.23
SLC48A1-209ENST00000552003 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.37□□□□□ -1.23
SLC48A1-209ENST00000552003 ATG12O94817 140 aa7.37□□□□□ -1.23
SLC48A1-209ENST00000552003 SFT2D2O95562 160 aa7.37□□□□□ -1.23
SLC48A1-209ENST00000552003 AMBPP02760 352 aa7.37□□□□□ -1.23
SLC48A1-209ENST00000552003 OR5AC1P0C628 307 aa7.37□□□□□ -1.23
SLC48A1-209ENST00000552003 OR4E1P0C645 316 aa7.37□□□□□ -1.23
SLC48A1-209ENST00000552003 RPA2P15927 270 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms