RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 HLA-DRB1P01911 266 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 COX6A1P12074 109 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 HIST1H1TP22492 207 aaPredicted RBP0.69□□□□□ -2.3
SCAF11-215ENST00000551391 NKX2-5P52952 324 aaPredicted RBP0.69□□□□□ -2.3
SCAF11-215ENST00000551391 SPCS3P61009 180 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 PSME3P61289 254 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 SNRPD2P62316 118 aaKnown RBP0.69□□□□□ -2.3
SCAF11-215ENST00000551391 HBA1P69905 142 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 HIST2H3PS2Q5TEC6 136 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 Q6ZQT0 140 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 TERB2Q8NHR7 220 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 IMP4Q96G21 291 aaKnown RBP0.69□□□□□ -2.3
SCAF11-215ENST00000551391 MIXL1Q9H2W2 232 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 CMTM6Q9NX76 183 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 FBXL12Q9NXK8 326 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 TP73-AS1Q9UF72 201 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 IGKV1D-42A0A075B6H8 117 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 LOC110117498A0A087WWA1 95 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 A0A0D9SG52 128 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 C19orf84I3L1E1 186 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 IFNA10P01566 189 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 CD79AP11912 226 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 FKBP2P26885 142 aaKnown RBP0.68□□□□□ -2.3
SCAF11-215ENST00000551391 PDE6HQ13956 83 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 SPANXN5Q5MJ07 72 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 LPCAT3Q6P1A2 487 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 MIR17HGQ75NE6 70 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 ALPK2Q86TB3 2170 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 PHF13Q86YI8 300 aaPredicted RBP0.68□□□□□ -2.3
SCAF11-215ENST00000551391 DDI1Q8WTU0 396 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 TOMM6Q96B49 74 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 NIPSNAP1Q9BPW8 284 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 SLC50A1Q9BRV3 221 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 COMMD5Q9GZQ3 224 aa0.68□□□□□ -2.3
SCAF11-215ENST00000551391 MICAL3Q7RTP6 2002 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 KIF13BQ9NQT8 1826 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 TNRC6BQ9UPQ9 1833 aaKnown RBP0.67□□□□□ -2.3
SCAF11-215ENST00000551391 DPRXA6NFQ7 191 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 M0R036 132 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 FADS1O60427 444 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 AHSA1O95433 338 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 MIFP14174 115 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 BRS3P32247 399 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 SULT1A1P50225 295 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 CCDC122Q5T0U0 273 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 H1FXQ92522 213 aaKnown RBP0.67□□□□□ -2.3
SCAF11-215ENST00000551391 LINC00526Q96FQ7 95 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 TSPAN32Q96QS1 320 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 TMEM56-RWDD3S4R434 201 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 ANAPC1Q9H1A4 1944 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 MTUS2Q5JR59 1369 aa0.67□□□□□ -2.3
SCAF11-215ENST00000551391 WRNQ14191 1432 aaPredicted RBP eCLIP0.66□□□□□ -2.3
SCAF11-215ENST00000551391 IGKV1-9A0A0C4DH69 117 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 C2orf70A6NJV1 201 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 FAAHO00519 579 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 OR2T1O43869 369 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 OR1I1O60431 355 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 TCL1BO95988 128 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 ASAH2BP0C7U1 165 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 CRYGAP11844 174 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 SPI1P17947 270 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 RPL5P46777 297 aaKnown RBP0.66□□□□□ -2.3
SCAF11-215ENST00000551391 IMPG1Q17R60 797 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 ACOT6Q3I5F7 207 aaPredicted RBP0.66□□□□□ -2.3
SCAF11-215ENST00000551391 MED12LQ86YW9 2145 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 CLVS1Q8IUQ0 354 aaPredicted RBP0.66□□□□□ -2.3
SCAF11-215ENST00000551391 OR4E2Q8NGC2 313 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 C20orf27Q9GZN8 174 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 C11orf68Q9H3H3 251 aaKnown RBP0.66□□□□□ -2.3
SCAF11-215ENST00000551391 NEO1Q92859 1461 aa0.66□□□□□ -2.3
SCAF11-215ENST00000551391 RP1P56715 2156 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 TGIF2-C20orf24A0A0A6YYL0 155 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 EXOC1LA0A1B0GW35 172 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 PQLC2LA1A4F0 135 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 BUB1B-PAK6H3BSN5 160 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 CHP2O43745 196 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 HYPMO75409 117 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 OR2B3O76000 313 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 TNNC2P02585 160 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 IFNA16P05015 189 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 SERPINA6P08185 405 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 BAALC-AS2P0C853 105 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 RHEBQ15382 184 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 KHDC3LQ587J8 217 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 C8orf74Q6P047 294 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 DPPA3Q6W0C5 159 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 BPIFA4PQ86YQ2 179 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 LINC00311Q8N616 119 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 SIGLECL1Q8N7X8 197 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 OR5A1Q8NGJ0 315 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 PPP1R2P1Q96PQ5 205 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 GINS4Q9BRT9 223 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 SLC39A9Q9NUM3 307 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 MRPL27Q9P0M9 148 aaKnown RBP0.65□□□□□ -2.31
SCAF11-215ENST00000551391 FBN2P35556 2912 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 ADGRB2O60241 1585 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 CCDC88AQ3V6T2 1871 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 EXPH5Q8NEV8 1989 aa0.65□□□□□ -2.31
SCAF11-215ENST00000551391 ZNF469Q96JG9 3925 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms