RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 AGRNO00468 2067 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 XRCC3O43542 346 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 MIFP14174 115 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 HLA-DMBP28068 263 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 G6PCP35575 357 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 DEFB131AP59861 70 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 UBE2UQ5VVX9 321 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 CDPF1Q6NVV7 123 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 TOMM20LQ6UXN7 152 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 ZNF114Q8NC26 417 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 OR5H6Q8NGV6 325 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 SLC25A38Q96DW6 304 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 TSC22D3Q99576 134 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 GINS3Q9BRX5 216 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 RNF126Q9BV68 326 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 DIABLOQ9NR28 239 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 FAM212BQ9NTI7 297 aaPredicted RBP7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 SSR3Q9UNL2 185 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 IGHV4-4A0A075B6R2 117 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 IGHV3OR16-13A0A075B7E8 117 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 IGHV3-74A0A0B4J1X5 117 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 IGHV4-28A0A0C4DH34 117 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 DNASE2O00115 360 aaPredicted RBP7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 ST8SIA3O43173 380 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 GNG7O60262 68 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 TMEM127O75204 238 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 MT-CO2P00403 227 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 APOHP02749 345 aaPredicted RBP7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 SDC2P34741 201 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 HERV-K104P61576 105 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 LEMD1Q68G75 181 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 MORN3Q6PF18 240 aaPredicted RBP7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 TRPT1Q86TN4 253 aaKnown RBP7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 TMEM17Q86X19 198 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 STHQ8IWL8 128 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 CMTM1Q8IZ96 169 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 ST8SIA2Q92186 375 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 MOB3AQ96BX8 217 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 MISP3Q96FF7 219 aa7.13□□□□□ -1.27
TRAFD1-207ENST00000550051 RLN1P04808 185 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 EIF4EP06730 217 aaKnown RBP7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 SPP1P10451 314 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 NAT1P18440 290 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 RFX2P48378 723 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 PVRIGQ6DKI7 326 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 Q6ZTC4 211 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 CENPSQ8N2Z9 138 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 POM121L12Q8N7R1 296 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 TSPAN14Q8NG11 270 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 GRAMD2BQ96HH9 432 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 TMEM231Q9H6L2 316 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 EHFQ9NZC4 300 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 ANAPC10Q9UM13 185 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 X6R8D5 127 aa7.12□□□□□ -1.27
TRAFD1-207ENST00000550051 PRSS29PA6NIE9 313 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 K7EQG2 157 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 GPR31O00270 319 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 RTL8CO15255 209 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 TMEM50AO95807 157 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 IGHV3-48P01763 117 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 FCER2P06734 321 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 P0DMU3 169 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 FAM231AP0DMU4 169 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 FAM231CP0DMU5 169 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 NPPCP23582 126 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 NPBWR1P48145 328 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 HSPA13P48723 471 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 GABARAPL2P60520 117 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 HSPE1P61604 102 aaKnown RBP7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 RPL11P62913 178 aaKnown RBP7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 ERHP84090 104 aaKnown RBP7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 PRCDQ00LT1 54 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 IDNKQ5T6J7 187 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 LPCAT3Q6P1A2 487 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 ZNF600Q6ZNG1 722 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 SPARTQ8N0X7 666 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 FAM24BQ8N5W8 94 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 OR6F1Q8NGZ6 308 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 FCGR1BQ92637 280 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 SEC22AQ96IW7 307 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 CNBD2Q96M20 576 aa7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 ZNF2Q9BSG1 426 aaPredicted RBP7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
TRAFD1-207ENST00000550051 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 A0A1B0GU03 582 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 A0A1W2PS18 150 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 INS-IGF2F8WCM5 200 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 AMBPP02760 352 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 CLEC2LP0C7M8 214 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 C12orf74Q32Q52 190 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 LGALS9BQ3B8N2 356 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 H2BFWTQ7Z2G1 175 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 LYSMD2Q8IV50 215 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 OR4A16Q8NH70 328 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 S100A16Q96FQ6 103 aaKnown RBP7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 IFT46Q9NQC8 304 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 TBC1D24Q9ULP9 559 aa7.1□□□□□ -1.27
TRAFD1-207ENST00000550051 PKHD1P08F94 4074 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 DNAH2Q9P225 4427 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms