RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 GNRHRP30968 328 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 CMC4P56277 68 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-218ENST00000548945 HERV-K104P61576 105 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 DHRS11Q6UWP2 260 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 TMEM17Q86X19 198 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 SCARB1Q8WTV0 552 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 C7orf50Q9BRJ6 194 aaKnown RBP9.5□□□□□ -0.89
PTCH1-218ENST00000548945 CHRDL1Q9BU40 450 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 MAP6D1Q9H9H5 199 aa9.5□□□□□ -0.89
PTCH1-218ENST00000548945 HECTD4Q9Y4D8 3996 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 ANKRD20A5PA0PJZ0 165 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 CENPXA8MT69 81 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-218ENST00000548945 K7EIM0 57 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 RCVRNP35243 200 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 ADMP35318 185 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 MFAP2P55001 183 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 KLF9Q13886 244 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-218ENST00000548945 LGALS9CQ6DKI2 356 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 OR5B3Q8NH48 314 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 C20orf24Q9BUV8 137 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 FKBP11Q9NYL4 201 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 KLK11Q9UBX7 282 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 OR51B2Q9Y5P1 312 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 DNAH10Q8IVF4 4471 aa9.49□□□□□ -0.89
PTCH1-218ENST00000548945 LINC00854A0A1B0GVQ3 168 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 PLA2G10O15496 165 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 LYRM1O43325 122 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 PGLYRP1O75594 196 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-218ENST00000548945 SNAPC5O75971 98 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 CTSDP07339 412 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-218ENST00000548945 CTSGP08311 255 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-218ENST00000548945 FAUP35544 74 aaKnown RBP9.48□□□□□ -0.89
PTCH1-218ENST00000548945 RELQ04864 619 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-218ENST00000548945 OXA1LQ15070 435 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 TRIM16LQ309B1 348 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 OR1P1Q8NH06 330 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 PHLDA1Q8WV24 401 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-218ENST00000548945 MOB3AQ96BX8 217 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 OR10C1Q96KK4 312 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 TMEM56Q96MV1 263 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 IFT46Q9NQC8 304 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 EHFQ9NZC4 300 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 PRNDQ9UKY0 176 aa9.48□□□□□ -0.89
PTCH1-218ENST00000548945 MEIS3P1A6NDR6 274 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 NAP1L6A6NFF2 107 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 NUPL2O15504 423 aaKnown RBP9.47□□□□□ -0.89
PTCH1-218ENST00000548945 KRASP01116 189 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 RLN1P04808 185 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 CD5P06127 495 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
PTCH1-218ENST00000548945 TAS2R19P59542 299 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 Q56UQ5 140 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 CMTM1Q8IZ96 169 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 CENPSQ8N2Z9 138 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 ENKURQ8TC29 256 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 TXN2Q99757 166 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 HINT2Q9BX68 163 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 C11orf68Q9H3H3 251 aaKnown RBP9.47□□□□□ -0.89
PTCH1-218ENST00000548945 FAM212BQ9NTI7 297 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-218ENST00000548945 TMEM14BQ9NUH8 114 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 ANAPC10Q9UM13 185 aa9.47□□□□□ -0.89
PTCH1-218ENST00000548945 IGHV3-21A0A0B4J1V1 117 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 IGHV7-4-1A0A0J9YVY3 117 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 MPTX1A8MV57 137 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 CHEK1O14757 476 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 AKAIN1P0CW23 69 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 NAT1P18440 290 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 TBPP20226 339 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 LPAR6P43657 344 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 TAS2R46P59540 309 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 RPP25LQ8N5L8 163 aaKnown RBP9.46□□□□□ -0.9
PTCH1-218ENST00000548945 UBAC2Q8NBM4 344 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 RNF2Q99496 336 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 ZNF2Q9BSG1 426 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-218ENST00000548945 RHPN1-AS1Q9BWJ2 59 aa9.46□□□□□ -0.9
PTCH1-218ENST00000548945 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 IGHV3OR16-8A0A075B7F1 116 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 FAM240BA0A1B0GVZ2 78 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 C15orf61A6NNL5 157 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 GPR31O00270 319 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 ZNF207O43670 478 aaKnown RBP9.45□□□□□ -0.9
PTCH1-218ENST00000548945 FCER2P06734 321 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 G6PCP35575 357 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 RFX2P48378 723 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 MFAP4P55083 255 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 STEAP1BQ6NZ63 245 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 NRARPQ7Z6K4 114 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 APRG1Q8IVJ8 170 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 ZNF414Q96IQ9 312 aa9.45□□□□□ -0.9
PTCH1-218ENST00000548945 RARRES2Q99969 163 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms