RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 OR4A16Q8NH70 328 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 ZNF502Q8TBZ5 544 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 VN1R17PQ8TDU5 208 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 DEDD2Q8WXF8 326 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 EEF1AKMT3Q96AZ1 226 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 CXorf58Q96LI9 332 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 TMEM56Q96MV1 263 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 TMEM222Q9H0R3 208 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 THYN1Q9P016 225 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 SCP2D1Q9UJQ7 156 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 C14orf166Q9Y224 244 aaKnown RBP10.48□□□□□ -0.73
PTCH1-217ENST00000548420 MFSD2BA6NFX1 497 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 PRSS29PA6NIE9 313 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 INS-IGF2F8WCM5 200 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 GGCTO75223 188 aaKnown RBP10.47□□□□□ -0.73
PTCH1-217ENST00000548420 ATG12O94817 140 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 OR5AC1P0C628 307 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 PRCDQ00LT1 54 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
PTCH1-217ENST00000548420 IZUMO4Q1ZYL8 232 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 AARDQ4LEZ3 155 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 CLEC19AQ6UXS0 136 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 OR2C3Q8N628 320 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 OR1L6Q8NGR2 347 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 LHFPL5Q8TAF8 219 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 TMEM230Q96A57 120 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 GALNT14Q96FL9 552 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
PTCH1-217ENST00000548420 KLK5Q9Y337 293 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-217ENST00000548420 PPP5D1E7EU14 171 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 LGALS9O00182 355 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 CYB5BO43169 146 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 OR2C1O95371 312 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 CLEC3BP05452 202 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 AP3S2P59780 193 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 DHODHQ02127 395 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 Q6ZRM9 215 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 Q8N1X5 172 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 ZNF114Q8NC26 417 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 OR1P1Q8NH06 330 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 SCGB3A2Q96PL1 93 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 HINT2Q9BX68 163 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 SRRQ9GZT4 340 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 S4R3C0 116 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 TMEM56-RWDD3S4R434 201 aa10.46□□□□□ -0.73
PTCH1-217ENST00000548420 A0A0G2JRQ6 117 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 K7EIM0 57 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 RTL8CO15255 209 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 IGHV3-23P01764 117 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 HLA-AP01891 365 aaKnown RBP10.45□□□□□ -0.74
PTCH1-217ENST00000548420 FAUP35544 74 aaKnown RBP10.45□□□□□ -0.74
PTCH1-217ENST00000548420 ARL3P36405 182 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 TRIM16LQ309B1 348 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 SPANXN2Q5MJ10 180 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 PVRIGQ6DKI7 326 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 SLC25A24Q6NUK1 477 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 FAM219AQ8IW50 185 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 SELENOHQ8IZQ5 122 aaKnown RBP10.45□□□□□ -0.74
PTCH1-217ENST00000548420 TOMM5Q8N4H5 51 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 MCUBQ9NWR8 336 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
PTCH1-217ENST00000548420 F8W735 103 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-217ENST00000548420 ST8SIA3O43173 380 aa10.44□□□□□ -0.74
PTCH1-217ENST00000548420 AKR1C2P52895 323 aa10.44□□□□□ -0.74
PTCH1-217ENST00000548420 SUPT4H1P63272 117 aaKnown RBP10.44□□□□□ -0.74
PTCH1-217ENST00000548420 TMEM187Q14656 261 aa10.44□□□□□ -0.74
PTCH1-217ENST00000548420 SCARB1Q8WTV0 552 aa10.44□□□□□ -0.74
PTCH1-217ENST00000548420 RBPMSQ93062 196 aaKnown RBP10.44□□□□□ -0.74
PTCH1-217ENST00000548420 IL22RA2Q969J5 263 aa10.44□□□□□ -0.74
PTCH1-217ENST00000548420 RRNAD1Q96FB5 475 aaKnown RBP10.44□□□□□ -0.74
PTCH1-217ENST00000548420 SDHCQ99643 169 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-217ENST00000548420 SRRM2Q9UQ35 2752 aaKnown RBP10.43□□□□□ -0.74
PTCH1-217ENST00000548420 I3L2K1 104 aa10.43□□□□□ -0.74
PTCH1-217ENST00000548420 BAK1Q16611 211 aa10.43□□□□□ -0.74
PTCH1-217ENST00000548420 FAM106AQ4KMX7 169 aa10.43□□□□□ -0.74
PTCH1-217ENST00000548420 OR52E5Q8NH55 327 aa10.43□□□□□ -0.74
PTCH1-217ENST00000548420 ZNF436Q9C0F3 470 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-217ENST00000548420 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
PTCH1-217ENST00000548420 C2orf70A6NJV1 201 aa10.42□□□□□ -0.74
PTCH1-217ENST00000548420 A8MWP6 167 aa10.42□□□□□ -0.74
PTCH1-217ENST00000548420 FCGR2BP31994 310 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-217ENST00000548420 ERHP84090 104 aaKnown RBP10.42□□□□□ -0.74
PTCH1-217ENST00000548420 SPSB3Q6PJ21 355 aa10.42□□□□□ -0.74
PTCH1-217ENST00000548420 OR2K2Q8NGT1 345 aa10.42□□□□□ -0.74
PTCH1-217ENST00000548420 GPR146Q96CH1 333 aa10.42□□□□□ -0.74
PTCH1-217ENST00000548420 BSCL2Q96G97 398 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-217ENST00000548420 SLC25A21Q9BQT8 299 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-217ENST00000548420 PLEKHA3Q9HB20 300 aa10.42□□□□□ -0.74
PTCH1-217ENST00000548420 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-217ENST00000548420 C21orf62Q9NYP8 219 aa10.42□□□□□ -0.74
PTCH1-217ENST00000548420 A0A0J9YWU9 116 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 TMEM213A2RRL7 107 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 TGOLN2O43493 480 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 CDK2AP2O75956 126 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 C8orf88P0DMB2 117 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 FOLR2P14207 255 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 GPR183P32249 361 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 SPCS3P61009 180 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 DEFB114Q30KQ6 69 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms