RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CNTFRP26992 372 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 CDC34P49427 236 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-215ENST00000547672 PSMB3P49720 205 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 B2MP61769 119 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 ZNF506Q5JVG8 444 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 C10orf91Q5T1B1 145 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 SPSB3Q6PJ21 355 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 S100A7AQ86SG5 101 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 RPP25LQ8N5L8 163 aaKnown RBP10.73□□□□□ -0.69
PTCH1-215ENST00000547672 LINC00052Q96N35 136 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 MGST2Q99735 147 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 MANBALQ9NQG1 85 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 TPSG1Q9NRR2 321 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 HIF1ANQ9NWT6 349 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 PITPNC1Q9UKF7 332 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
PTCH1-215ENST00000547672 ASH1LQ9NR48 2969 aaKnown RBP10.72□□□□□ -0.69
PTCH1-215ENST00000547672 NPIPB5A8MRT5 1133 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 M0QZK8 103 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 SNAPINO95295 136 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 APOC3P02656 99 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 FBP1P09467 338 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 HIST1H1BP16401 226 aaKnown RBP10.72□□□□□ -0.69
PTCH1-215ENST00000547672 C10orf55Q5SWW7 151 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 ACSM6Q6P461 480 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 LCN15Q6UWW0 184 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 SLC35E3Q7Z769 313 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 OR1L4Q8NGR5 311 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 SSMEM1Q8WWF3 244 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 ARPC1AQ92747 370 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 RAB24Q969Q5 203 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 MISP3Q96FF7 219 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 VAX2Q9UIW0 290 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 SLC45A2Q9UMX9 530 aa10.72□□□□□ -0.69
PTCH1-215ENST00000547672 ARHGAP32A7KAX9 2087 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 TEX22C9J3V5 150 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 E7EUB6 86 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 FCN1O00602 326 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 CXorf1O96002 111 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 HLA-DRB1P01911 266 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 CRYGCP07315 174 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 TAS2R45P59539 299 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 PRR20EP86478 221 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 PRR20CP86479 221 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 PRR20DP86480 221 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 PRR20BP86481 221 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 PRR20AP86496 221 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 FAM122CQ6P4D5 195 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 STPG3Q8N7X2 389 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 THAP8Q8NA92 274 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 TMEM116Q8NCL8 245 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 GATAD1Q8WUU5 269 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 PSMG3-AS1Q96PY0 264 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 PFDN5Q99471 154 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
PTCH1-215ENST00000547672 HELZ2Q9BYK8 2649 aaKnown RBP10.71□□□□□ -0.7
PTCH1-215ENST00000547672 TNCP24821 2201 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 ELOA3CA0A087WX78 387 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-215ENST00000547672 ZFP92A6NM28 416 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 SFTA3P0C7M3 94 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 CTRB1P17538 263 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 OR10J1P30954 320 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 CX3CL1P78423 397 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 DEFA5Q01523 94 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 SOHLH1Q5JUK2 328 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 MIC13Q5XKP0 118 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 CTRB2Q6GPI1 263 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 CYP2G1PQ6ZSU1 146 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 C16orf82Q7Z2V1 217 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 DYNAPQ8N1N2 210 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 TTC9CQ8N5M4 171 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 ACY3Q96HD9 319 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 TRGV9Q99603 122 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 WNT10AQ9GZT5 417 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 VSIRQ9H7M9 311 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 TENM4Q6N022 2769 aa10.7□□□□□ -0.7
PTCH1-215ENST00000547672 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 BCL2P10415 239 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 AREGP15514 252 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 S100A7P31151 101 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 CCL20P78556 96 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 NPIPB3Q92617 1050 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 NRGNQ92686 78 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 RBM14Q96PK6 669 aaKnown RBP10.69□□□□□ -0.7
PTCH1-215ENST00000547672 MRPL32Q9BYC8 188 aaKnown RBP10.69□□□□□ -0.7
PTCH1-215ENST00000547672 DNAJC4Q9NNZ3 241 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 TECRQ9NZ01 308 aaKnown RBP10.69□□□□□ -0.7
PTCH1-215ENST00000547672 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 RELNP78509 3460 aa10.69□□□□□ -0.7
PTCH1-215ENST00000547672 TRAV40A0A0B4J280 105 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 LOC102723971A0A1B0GUV8 181 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 A0A1B0GV50 99 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 CLN5O75503 358 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 TGFAP01135 160 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 REG1AP05451 166 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms