RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 OR2V2Q96R30 315 aa12.5□□□□□ -0.41
BRF1-211ENST00000547530 S4R3C0 116 aa12.5□□□□□ -0.41
BRF1-211ENST00000547530 TYMSP04818 313 aa12.5□□□□□ -0.41
BRF1-211ENST00000547530 UBE2G1P62253 170 aa12.5□□□□□ -0.41
BRF1-211ENST00000547530 SLC35E4Q6ICL7 350 aa12.5□□□□□ -0.41
BRF1-211ENST00000547530 LINC00173Q6ZV60 143 aa12.5□□□□□ -0.41
BRF1-211ENST00000547530 OR1B1Q8NGR6 318 aa12.5□□□□□ -0.41
BRF1-211ENST00000547530 EXPH5Q8NEV8 1989 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 BMPR1BO00238 502 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 COX7A2P2O60397 106 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 NUDT3O95989 172 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 SSBP2P81877 361 aaPredicted RBP12.49□□□□□ -0.41
BRF1-211ENST00000547530 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
BRF1-211ENST00000547530 ZNF718Q3SXZ3 478 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 ZNF766Q5HY98 468 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 WFDC3Q8IUB2 231 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 MBNL3Q9NUK0 354 aaKnown RBP12.49□□□□□ -0.41
BRF1-211ENST00000547530 BET1LQ9NYM9 111 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
BRF1-211ENST00000547530 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
BRF1-211ENST00000547530 CA7P43166 264 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 FAM216BQ8N7L0 139 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 Q8NFD4 153 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 OR52E5Q8NH55 327 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 COMMD5Q9GZQ3 224 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 GGTLC3B5MD39 225 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 C9orf172C9J069 976 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 CECR9P0C854 216 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 ZNF146Q15072 292 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 GABRA6Q16445 453 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 KRTAP27-1Q3LI81 207 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 MORN2Q502X0 79 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 MPV17L2Q567V2 206 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 LINC00596Q86U02 117 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 C1orf174Q8IYL3 243 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 OR4B1Q8NGF8 309 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 TSKUQ8WUA8 353 aa12.49□□□□□ -0.41
BRF1-211ENST00000547530 PARD6GQ9BYG4 376 aaPredicted RBP12.49□□□□□ -0.41
BRF1-211ENST00000547530 KLF13Q9Y2Y9 288 aaPredicted RBP12.49□□□□□ -0.41
BRF1-211ENST00000547530 LOC389332A0A1B0GUA5 103 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 MMP23AO75900 390 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 LINC00869P0C866 280 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 TMEM11P17152 192 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 TCTEX1D1Q8N7M0 179 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 NPIPB3Q92617 1050 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 ZGRF1Q86YA3 2104 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 MALRD1Q5VYJ5 2156 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 FBLL1A6NHQ2 334 aaKnown RBP12.48□□□□□ -0.41
BRF1-211ENST00000547530 C10orf142B7Z368 130 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
BRF1-211ENST00000547530 SELENOVP59797 346 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 IGFBPL1Q8WX77 278 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 CXXC4Q9H2H0 198 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 V9GYV3 84 aa12.48□□□□□ -0.41
BRF1-211ENST00000547530 TRAV8-1A0A0A6YYK1 113 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 BTF3P20290 206 aaKnown RBP12.47□□□□□ -0.41
BRF1-211ENST00000547530 TM4SF20Q53R12 229 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 SLC45A2Q9UMX9 530 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 NKX2-8O15522 239 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 TMEM45BQ96B21 275 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 PCED1AQ9H1Q7 454 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 HIGD1CA8MV81 97 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 CDX2Q99626 313 aaPredicted RBP12.47□□□□□ -0.41
BRF1-211ENST00000547530 CALYQ9NYX4 217 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 AMMECR1Q9Y4X0 333 aaPredicted RBP12.47□□□□□ -0.41
BRF1-211ENST00000547530 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
BRF1-211ENST00000547530 SERTM2A0A1B0GWG4 89 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 ISLRO14498 428 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 IGLC2P0DOY2 106 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 IGLC3P0DOY3 106 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 LDLRAD2Q5SZI1 272 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 RAB37Q96AX2 223 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 LOXL4Q96JB6 756 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 ZFP30Q9Y2G7 519 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 PPOXP50336 477 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 TEX43Q6ZNM6 134 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 OR4S2Q8NH73 311 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 DAZAP1Q96EP5 407 aaKnown RBP12.46□□□□□ -0.41
BRF1-211ENST00000547530 LINC00470Q9BZP3 86 aa12.46□□□□□ -0.41
BRF1-211ENST00000547530 ERVK11-1P61568 191 aa12.46□□□□□ -0.42
BRF1-211ENST00000547530 ALKBH7Q9BT30 221 aaPredicted RBP12.46□□□□□ -0.42
BRF1-211ENST00000547530 IGKV1OR2-108A0A075B7D4 117 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 IGKV3D-15A0A087WSY6 115 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 PGPA6NDG6 321 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 HSPE1P61604 102 aaKnown RBP12.45□□□□□ -0.42
BRF1-211ENST00000547530 CT45A1Q5HYN5 189 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 KLHDC1Q8N7A1 406 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 Q8N7P7 452 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 ZNF738Q8NE65 137 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 OR8B3Q8NGG8 313 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 CT45A3Q8NHU0 189 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 IGKV1D-17A0A075B6S4 117 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 IGLL1P15814 213 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 TSPOP30536 169 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
BRF1-211ENST00000547530 C11orf53Q8IXP5 236 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms