RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TRAV6A0A075B6T7 132 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 MFSD2BA6NFX1 497 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 G3V4G9 280 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 I3L2K1 104 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 CORTO00230 105 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 GGCTO75223 188 aaKnown RBP11.1□□□□□ -0.63
DDX54-203ENST00000546869 IFNA21P01568 189 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 TRBV12-3P01733 135 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 CLEC3BP05452 202 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 HOXB5P09067 269 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 SLURP1P55000 103 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 TATDN3Q17R31 274 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 BEAN1Q3B7T3 259 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 C2orf83Q53S99 150 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 SPINK9Q5DT21 86 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 C9orf66Q5T8R8 295 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 NRARPQ7Z6K4 114 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 NOXA1Q86UR1 476 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 OR1S1Q8NH92 325 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 ZNF431Q8TF32 576 aaPredicted RBP11.1□□□□□ -0.63
DDX54-203ENST00000546869 TXN2Q99757 166 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 HIPK2Q9H2X6 1198 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 HEYLQ9NQ87 328 aaPredicted RBP11.1□□□□□ -0.63
DDX54-203ENST00000546869 GAR1Q9NY12 217 aaKnown RBP11.1□□□□□ -0.63
DDX54-203ENST00000546869 U3KQ87 197 aa11.1□□□□□ -0.63
DDX54-203ENST00000546869 CEBPZOSA8MTT3 80 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 LY86O95711 162 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 ARL3P36405 182 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 EGFEM1PQ0D2K5 195 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 ACSM6Q6P461 480 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 SPSB3Q6PJ21 355 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 CLEC19AQ6UXS0 136 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 C1QL4Q86Z23 238 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 C21orf62Q9NYP8 219 aa11.09□□□□□ -0.63
DDX54-203ENST00000546869 ZMAT5Q9UDW3 170 aaKnown RBP11.09□□□□□ -0.63
DDX54-203ENST00000546869 LGALS9O00182 355 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 MED6O75586 246 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 ADAP1O75689 374 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 ID3Q02535 119 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 DTD1Q8TEA8 209 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 BSCL2Q96G97 398 aaPredicted RBP11.08□□□□□ -0.64
DDX54-203ENST00000546869 MARVELD1Q9BSK0 173 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 ELOVL1Q9BW60 279 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 RBKSQ9H477 322 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 PALMDQ9NP74 551 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 SIGLEC8Q9NYZ4 499 aa11.08□□□□□ -0.64
DDX54-203ENST00000546869 NOTCH3Q9UM47 2321 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 SEC14L6B5MCN3 397 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
DDX54-203ENST00000546869 PRAF2O60831 178 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 MT-CO2P00403 227 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 MFAP4P55083 255 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 C12orf45Q8N5I9 185 aaPredicted RBP11.07□□□□□ -0.64
DDX54-203ENST00000546869 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 OR52B4Q8NGK2 314 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
DDX54-203ENST00000546869 MISP3Q96FF7 219 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 CIB3Q96Q77 187 aaPredicted RBP11.07□□□□□ -0.64
DDX54-203ENST00000546869 CMYA5Q8N3K9 4069 aa11.07□□□□□ -0.64
DDX54-203ENST00000546869 SNRPGP15A8MWD9 76 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 PPP5D1E7EU14 171 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 INMT-MINDY4F8WBC2 141 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 TGOLN2O43493 480 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 SYNGR2O43760 224 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 OR2C1O95371 312 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 SYNJ2BPP57105 145 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 FAM106AQ4KMX7 169 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 IL34Q6ZMJ4 242 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 OR4D5Q8NGN0 318 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 SEC22CQ9BRL7 303 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
DDX54-203ENST00000546869 GPN1Q9HCN4 374 aaPredicted RBP11.06□□□□□ -0.64
DDX54-203ENST00000546869 PEMTQ9UBM1 199 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 S4R3C0 116 aa11.06□□□□□ -0.64
DDX54-203ENST00000546869 MPTX1A8MV57 137 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 CTSGP08311 255 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 NPY1RP25929 384 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 GPR183P32249 361 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 NPBWR1P48145 328 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 ETFRF1Q6IPR1 90 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 TMEM170AQ8WVE7 144 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 OR10C1Q96KK4 312 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 OR4C12Q96R67 309 aa11.05□□□□□ -0.64
DDX54-203ENST00000546869 NOTCH1P46531 2555 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 RPS10-NUDT3A0A1W2PQS6 291 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 OR2T8A6NH00 312 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 A8MWP6 167 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 NXPH3O95157 252 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 IFNA10P01566 189 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 SLC25A4P12235 298 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 ADMP35318 185 aa11.04□□□□□ -0.64
DDX54-203ENST00000546869 NKX2-1P43699 371 aaPredicted RBP11.04□□□□□ -0.64
DDX54-203ENST00000546869 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
DDX54-203ENST00000546869 RPP30P78346 268 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms