RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 HIPK2Q9H2X6 1198 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 BMPR1BO00238 502 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
LTBR-215ENST00000546296 SLC25A6P12236 298 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 TNFRSF9Q07011 255 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 KLF5Q13887 457 aaPredicted RBP12.92□□□□□ -0.34
LTBR-215ENST00000546296 PDLIM3Q53GG5 364 aaPredicted RBP12.92□□□□□ -0.34
LTBR-215ENST00000546296 C9orf66Q5T8R8 295 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 PINX1Q96BK5 328 aaKnown RBP12.92□□□□□ -0.34
LTBR-215ENST00000546296 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 ELOVL1Q9BW60 279 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 C21orf62Q9NYP8 219 aa12.92□□□□□ -0.34
LTBR-215ENST00000546296 ADAP1O75689 374 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 RNASE2P10153 161 aaKnown RBP12.91□□□□□ -0.34
LTBR-215ENST00000546296 GPR183P32249 361 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 HTR2BP41595 481 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 UXS1Q8NBZ7 420 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 SCARB1Q8WTV0 552 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 SEC22CQ9BRL7 303 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 RBKSQ9H477 322 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 ZC4H2Q9NQZ6 224 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
LTBR-215ENST00000546296 NOTCH1P46531 2555 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 MEGF8Q7Z7M0 2845 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 K7EIM0 57 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 SAP30O75446 220 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 OR2C1O95371 312 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 MT-CO2P00403 227 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 BEAN1Q3B7T3 259 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 Q56UQ5 140 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 PLET1Q6UQ28 207 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 NRARPQ7Z6K4 114 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 UBAC2Q8NBM4 344 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 DTD1Q8TEA8 209 aa12.9□□□□□ -0.34
LTBR-215ENST00000546296 ZNF431Q8TF32 576 aaPredicted RBP12.9□□□□□ -0.34
LTBR-215ENST00000546296 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 OR2T8A6NH00 312 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 I3L2K1 104 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 CORTO00230 105 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 PITX3O75364 302 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 MED6O75586 246 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 MFAP4P55083 255 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 DEFA6Q01524 100 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 NOXA1Q86UR1 476 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 OR4C12Q96R67 309 aa12.89□□□□□ -0.35
LTBR-215ENST00000546296 FAM90A26D6RGX4 464 aa12.88□□□□□ -0.35
LTBR-215ENST00000546296 IFNA10P01566 189 aa12.88□□□□□ -0.35
LTBR-215ENST00000546296 INSL3P51460 131 aa12.88□□□□□ -0.35
LTBR-215ENST00000546296 FAM106AQ4KMX7 169 aa12.88□□□□□ -0.35
LTBR-215ENST00000546296 KPRPQ5T749 579 aaPredicted RBP12.88□□□□□ -0.35
LTBR-215ENST00000546296 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
LTBR-215ENST00000546296 SLC24A4Q8NFF2 622 aa12.88□□□□□ -0.35
LTBR-215ENST00000546296 OR9G4Q8NGQ1 327 aa12.88□□□□□ -0.35
LTBR-215ENST00000546296 GAR1Q9NY12 217 aaKnown RBP12.88□□□□□ -0.35
LTBR-215ENST00000546296 ZMAT5Q9UDW3 170 aaKnown RBP12.88□□□□□ -0.35
LTBR-215ENST00000546296 ZNF320A2RRD8 509 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 TGOLN2O43493 480 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 IL5P05113 134 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 NPY1RP25929 384 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 OPRK1P41145 380 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 BSXQ3C1V8 233 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 C2orf83Q53S99 150 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 C11orf87Q6NUJ2 197 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 SPSB3Q6PJ21 355 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 GPHB5Q86YW7 130 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
LTBR-215ENST00000546296 BSCL2Q96G97 398 aaPredicted RBP12.87□□□□□ -0.35
LTBR-215ENST00000546296 ATP6V0BQ99437 205 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 TXN2Q99757 166 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 MAGT1Q9H0U3 335 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 GPN1Q9HCN4 374 aaPredicted RBP12.87□□□□□ -0.35
LTBR-215ENST00000546296 PEMTQ9UBM1 199 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 U3KQ87 197 aa12.87□□□□□ -0.35
LTBR-215ENST00000546296 IGHV3-35A0A0C4DH35 117 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 MPTX1A8MV57 137 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 FAM25EA8MYX2 175 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 INMT-MINDY4F8WBC2 141 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 IAPPP10997 89 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 NPBWR1P48145 328 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 IAH1Q2TAA2 248 aaPredicted RBP12.86□□□□□ -0.35
LTBR-215ENST00000546296 PVRIGQ6DKI7 326 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
LTBR-215ENST00000546296 RPS10-NUDT3A0A1W2PQS6 291 aa12.85□□□□□ -0.35
LTBR-215ENST00000546296 WRBO00258 174 aa12.85□□□□□ -0.35
LTBR-215ENST00000546296 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
LTBR-215ENST00000546296 SYNGR2O43760 224 aa12.85□□□□□ -0.35
LTBR-215ENST00000546296 GNG7O60262 68 aa12.85□□□□□ -0.35
LTBR-215ENST00000546296 PRB2P02812 416 aaPredicted RBP12.85□□□□□ -0.35
LTBR-215ENST00000546296 RNASEH2CQ8TDP1 164 aaKnown RBP12.85□□□□□ -0.35
LTBR-215ENST00000546296 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
LTBR-215ENST00000546296 PAIP2BQ9ULR5 123 aaKnown RBP12.85□□□□□ -0.35
LTBR-215ENST00000546296 C5orf51A6NDU8 294 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 CCSO14618 274 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 WIPF1O43516 503 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms