RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 MT-CO2P00403 227 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 HLA-DMBP28068 263 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 DEFB131AP59861 70 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 TRPT1Q86TN4 253 aaKnown RBP12.08□□□□□ -0.48
CPSF7-225ENST00000545934 SPARTQ8N0X7 666 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 MISP3Q96FF7 219 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 GINS3Q9BRX5 216 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 FXYD6Q9H0Q3 95 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 EHFQ9NZC4 300 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 SSR3Q9UNL2 185 aa12.08□□□□□ -0.48
CPSF7-225ENST00000545934 IGHV4-4A0A075B6R2 117 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 ANKRD65E5RJM6 399 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 MED14OSP0DP75 135 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 MIFP14174 115 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 TMEM41BQ5BJD5 291 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 Q6ZTC4 211 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 TSC22D3Q99576 134 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 ZNF2Q9BSG1 426 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-225ENST00000545934 DIABLOQ9NR28 239 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 FAM212BQ9NTI7 297 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-225ENST00000545934 X6R8D5 127 aa12.07□□□□□ -0.48
CPSF7-225ENST00000545934 ELOA3CA0A087WX78 387 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-225ENST00000545934 TRAV10A0A0B4J240 114 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 ST8SIA3O43173 380 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 XRCC3O43542 346 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 GNG7O60262 68 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 NAT1P18440 290 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 PSMB9P28065 219 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 RFX2P48378 723 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 MXD1Q05195 221 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 SEC22AQ96IW7 307 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 RNF167Q9H6Y7 350 aa12.06□□□□□ -0.48
CPSF7-225ENST00000545934 GPR31O00270 319 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 C4BPBP20851 252 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 HSPA13P48723 471 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 IDNKQ5T6J7 187 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 IZUMO2Q6UXV1 221 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 STHQ8IWL8 128 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 CMTM1Q8IZ96 169 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 CSNK1G2-AS1Q8NCQ2 148 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 DUSP18Q8NEJ0 188 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 FCGR1BQ92637 280 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 RNF126Q9BV68 326 aa12.05□□□□□ -0.48
CPSF7-225ENST00000545934 K7EQG2 157 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 DNASE2O00115 360 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-225ENST00000545934 RTL8CO15255 209 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 EIF4EP06730 217 aaKnown RBP12.04□□□□□ -0.48
CPSF7-225ENST00000545934 SPP1P10451 314 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 PVRIGQ6DKI7 326 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-225ENST00000545934 ZNF600Q6ZNG1 722 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 TSPAN14Q8NG11 270 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 GRAMD2BQ96HH9 432 aa12.04□□□□□ -0.48
CPSF7-225ENST00000545934 PUS1Q9Y606 427 aaKnown RBP eCLIP12.04□□□□□ -0.48
CPSF7-225ENST00000545934 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
CPSF7-225ENST00000545934 A0A1B0GU03 582 aa12.03□□□□□ -0.48
CPSF7-225ENST00000545934 TMEM127O75204 238 aa12.03□□□□□ -0.48
CPSF7-225ENST00000545934 PMP2P02689 132 aa12.03□□□□□ -0.48
CPSF7-225ENST00000545934 AMBPP02760 352 aa12.03□□□□□ -0.48
CPSF7-225ENST00000545934 PINX1Q96BK5 328 aaKnown RBP12.03□□□□□ -0.48
CPSF7-225ENST00000545934 IFT46Q9NQC8 304 aa12.03□□□□□ -0.48
CPSF7-225ENST00000545934 TMEM50AO95807 157 aa12.02□□□□□ -0.49
CPSF7-225ENST00000545934 TAS2R46P59540 309 aa12.02□□□□□ -0.49
CPSF7-225ENST00000545934 HSPE1P61604 102 aaKnown RBP12.02□□□□□ -0.49
CPSF7-225ENST00000545934 LYSMD2Q8IV50 215 aa12.02□□□□□ -0.49
CPSF7-225ENST00000545934 OR4A16Q8NH70 328 aa12.02□□□□□ -0.49
CPSF7-225ENST00000545934 VCX3BQ9H321 246 aa12.02□□□□□ -0.49
CPSF7-225ENST00000545934 TMEM231Q9H6L2 316 aa12.02□□□□□ -0.49
CPSF7-225ENST00000545934 RAB26Q9ULW5 256 aa12.02□□□□□ -0.49
CPSF7-225ENST00000545934 PRSS29PA6NIE9 313 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 INS-IGF2F8WCM5 200 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 NPBWR1P48145 328 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
CPSF7-225ENST00000545934 C12orf74Q32Q52 190 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 PHLDA2Q53GA4 152 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 H2BFWTQ7Z2G1 175 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 OR5H2Q8NGV7 314 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 OR6F1Q8NGZ6 308 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 DCANP1Q8TF63 244 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 RABAC1Q9UI14 185 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 CELA1Q9UNI1 258 aa12.01□□□□□ -0.49
CPSF7-225ENST00000545934 CRYBB3P26998 211 aa12□□□□□ -0.49
CPSF7-225ENST00000545934 ERHP84090 104 aaKnown RBP12□□□□□ -0.49
CPSF7-225ENST00000545934 TBC1D26Q86UD7 250 aa12□□□□□ -0.49
CPSF7-225ENST00000545934 S100A16Q96FQ6 103 aaKnown RBP12□□□□□ -0.49
CPSF7-225ENST00000545934 HSPG2P98160 4391 aa12□□□□□ -0.49
CPSF7-225ENST00000545934 NACAE9PAV3 2078 aa11.99□□□□□ -0.49
CPSF7-225ENST00000545934 KNCNA6PVL3 124 aa11.99□□□□□ -0.49
CPSF7-225ENST00000545934 P0DMU3 169 aa11.99□□□□□ -0.49
CPSF7-225ENST00000545934 FAM231AP0DMU4 169 aa11.99□□□□□ -0.49
CPSF7-225ENST00000545934 FAM231CP0DMU5 169 aa11.99□□□□□ -0.49
CPSF7-225ENST00000545934 NPPCP23582 126 aa11.99□□□□□ -0.49
CPSF7-225ENST00000545934 TAS2R20P59543 309 aa11.99□□□□□ -0.49
CPSF7-225ENST00000545934 MRGPRFQ96AM1 343 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms