RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SELENOVP59797 346 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 C10orf55Q5SWW7 151 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 TMEM167BQ9NRX6 74 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 SLC25A10Q9UBX3 287 aaPredicted RBP12.84□□□□□ -0.35
LDLR-204ENST00000545707 NAT8BQ9UHF3 227 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 ZNF257Q9Y2Q1 563 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 TACC2O95359 2948 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 TPPP2P59282 170 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 MRPL54Q6P161 138 aaKnown RBP12.84□□□□□ -0.35
LDLR-204ENST00000545707 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 GNB4Q9HAV0 340 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 RAB9BQ9NP90 201 aa12.84□□□□□ -0.35
LDLR-204ENST00000545707 FCN3O75636 299 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 IGLV2-8P01709 118 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 CD40P25942 277 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 LHFPL4Q7Z7J7 247 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 VN1R17PQ8TDU5 208 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 SAMD10Q9BYL1 202 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 NCOR1P1Q9H4R4 102 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 CHODLQ9H9P2 273 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 TANC2Q9HCD6 1990 aa12.83□□□□□ -0.35
LDLR-204ENST00000545707 PCNX1Q96RV3 2341 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 DYSFO75923 2080 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 NAV3Q8IVL0 2385 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 KIR2DL5BA0A0G2JN68 375 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 KIR2DL5BA0A0G2JPC4 375 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 PYYP10082 97 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 TIGITQ495A1 244 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 LBHQ53QV2 105 aaPredicted RBP12.83□□□□□ -0.36
LDLR-204ENST00000545707 C2orf83Q53S99 150 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 TPTE2P1Q5T6R2 138 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 ZNF705AQ6ZN79 300 aaPredicted RBP12.83□□□□□ -0.36
LDLR-204ENST00000545707 KIR2DL5AQ8N109 375 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 FAM168AQ92567 244 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 SLC25A33Q9BSK2 321 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 SFXN3Q9BWM7 321 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 PAM16Q9Y3D7 125 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 LY96Q9Y6Y9 160 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 ANKRD11Q6UB99 2663 aaPredicted RBP12.83□□□□□ -0.36
LDLR-204ENST00000545707 BSNQ9UPA5 3926 aa12.83□□□□□ -0.36
LDLR-204ENST00000545707 TCAPO15273 167 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 OR5G3P0C626 314 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 IRF2P14316 349 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 CD69Q07108 199 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 C1orf185Q5T7R7 199 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
LDLR-204ENST00000545707 COMMD5Q9GZQ3 224 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
LDLR-204ENST00000545707 OR5AU1Q8NGC0 362 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 PLXNB1O43157 2135 aa12.82□□□□□ -0.36
LDLR-204ENST00000545707 hADV38S2A0JD32 116 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 C8orf88P0DMB2 117 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 TNFSF4P23510 183 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 SLC35E1Q96K37 410 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
LDLR-204ENST00000545707 TRAV9-1A0A075B6T8 112 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 CEACAM4O75871 244 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 PLAUP00749 431 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 G0S2P27469 103 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 CX3CL1P78423 397 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 PRR31Q5SQ13 230 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 IBA57Q5T440 356 aaKnown RBP12.81□□□□□ -0.36
LDLR-204ENST00000545707 TMEM136Q6ZRR5 245 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 SLC25A2Q9BXI2 301 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 FNDC4Q9H6D8 234 aaPredicted RBP12.81□□□□□ -0.36
LDLR-204ENST00000545707 LINC00574Q9H8X3 128 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 FBXL7Q9UJT9 491 aa12.81□□□□□ -0.36
LDLR-204ENST00000545707 H0YJW9 148 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 REG1AP05451 166 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
LDLR-204ENST00000545707 WFDC8Q8IUA0 241 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 OR1L8Q8NGR8 309 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 H1FXQ92522 213 aaKnown RBP12.8□□□□□ -0.36
LDLR-204ENST00000545707 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
LDLR-204ENST00000545707 ZNF292O60281 2723 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 SPTBN2O15020 2390 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 M0R143 59 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 TM4SF5O14894 197 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 TAS2R45P59539 299 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 RPL8P62917 257 aaKnown RBP12.8□□□□□ -0.36
LDLR-204ENST00000545707 WT1-ASQ06250 92 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 NPIPB3Q92617 1050 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 IGF2BP2-AS1Q96M15 143 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
LDLR-204ENST00000545707 ZFHX2Q9C0A1 2572 aaPredicted RBP12.8□□□□□ -0.36
LDLR-204ENST00000545707 ESDP10768 282 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 PPOXP50336 477 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 KRTDAPP60985 99 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 RANP62826 216 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms