RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SPINT4Q6UDR6 99 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 DCXRQ7Z4W1 244 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 LINC00471Q8N535 108 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 LINC00311Q8N616 119 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 C8orf31Q8N9H6 132 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 C1orf64Q8NEQ6 169 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 OR8B12Q8NGG6 310 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 OR9G4Q8NGQ1 327 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 OR2T10Q8NGZ9 312 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 HAVCR2Q8TDQ0 301 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 RASSF5Q8WWW0 418 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.71□□□□□ -2.146e-13■■□□□ 14.1
SNHG1-224ENST00000545688 RPEQ96AT9 228 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 SLAMF6Q96DU3 332 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 COQ2Q96H96 371 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 SPACA5Q96QH8 159 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 OR5B12Q96R08 314 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 OR52B2Q96RD2 323 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 NMNAT3Q96T66 252 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 AMELYQ99218 206 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 GGTLC1Q9BX51 225 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 TMEM59Q9BXS4 323 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 PKIBQ9C010 78 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 C11orf68Q9H3H3 251 aaKnown RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 ANKRD19PQ9H560 264 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 PLEKHA1Q9HB21 404 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 MTCH1Q9NZJ7 389 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 LGALS13Q9UHV8 139 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 SLC7A11Q9UPY5 501 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 POLR1DQ9Y2S0 133 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 IER3IP1Q9Y5U9 82 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 MUC2Q02817 5179 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 IGKV1-27A0A075B6S5 117 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 IGHV3OR16-8A0A075B7F1 116 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 TRAV41A0A0B4J266 112 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ODAMA1E959 279 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 METTL21EPA6NDL7 271 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 TVP23AA6NH52 213 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 FAM183AA6NL82 134 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF729A6NN14 1252 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 NCBP2LA6PVI3 153 aaKnown RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 EVPLLA8MZ36 301 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF593O00488 134 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 UBDO15205 165 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ENTPD6O75354 484 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 NDUFA3O95167 84 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 RAB3DO95716 219 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF682O95780 498 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 HAND1O96004 215 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 APOC1P02654 83 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 TROVE2P10155 538 aaKnown RBP eCLIP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 CTRB1P17538 263 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 BLVRBP30043 206 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 HAAOP46952 286 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 CDC42P60953 191 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 SELENOWP63302 87 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 APOFQ13790 326 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 DGCR6Q14129 220 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 TRAM2Q15035 370 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 GRK1Q15835 563 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 DEFB114Q30KQ6 69 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 Q3ZCU0 254 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 TNFAIP8L3Q5GJ75 292 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF660Q6AZW8 331 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 TEX43Q6ZNM6 134 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ANGPTL5Q86XS5 388 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 TCTEX1D1Q8N7M0 179 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 YIPF7Q8N8F6 280 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ASCC1Q8N9N2 400 aaKnown RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 OR4K13Q8NH42 304 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 IFT81Q8WYA0 676 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 EMG1Q92979 244 aaKnown RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 CGREF1Q99674 301 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 COPS4Q9BT78 406 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 GAL3ST2Q9H3Q3 398 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 RERGLQ9H628 205 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 NIPAL2Q9H841 368 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 RPRD1BQ9NQG5 326 aaKnown RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 ENPP5Q9UJA9 477 aa1.7□□□□□ -2.14
SNHG1-224ENST00000545688 AMMECR1Q9Y4X0 333 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-224ENST00000545688 LOC102724200A0A096LPH7 203 aaPredicted RBP1.69□□□□□ -2.14
SNHG1-224ENST00000545688 TRGV10A0A0A0MS01 117 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 IGHV3-72A0A0B4J1Y9 119 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 A0A1B0GTI1 187 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 TRPC5OSA6NMA1 111 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 M0R2N4 97 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 FXYD1O00168 92 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 TOR1AO14656 332 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 MAGEB3O15480 346 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 E2F6O75461 281 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 OR2A4O95047 310 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 SERPINA1P01009 418 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 NRASP01111 189 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 TRBV12-3P01733 135 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 IGHV3-11P01762 117 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF735P0CB33 412 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 P0DMU3 169 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 FAM231AP0DMU4 169 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 FAM231CP0DMU5 169 aa1.69□□□□□ -2.14
SNHG1-224ENST00000545688 DCKP27707 260 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms