RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 B9A039 149 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 CORTO00230 105 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 PAFAH1B2P68402 229 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 ZNF90Q03938 601 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 RPEL1Q2QD12 228 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 SPATA31B1PQ5VZV4 182 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 RASL11AQ6T310 242 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 MIR17HGQ75NE6 70 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 ABHD17AQ96GS6 310 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 VKORC1Q9BQB6 163 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 DNAJC4Q9NNZ3 241 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
PAAF1-215ENST00000544909 TCRBV4S1A1TA0A5B7 111 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 OR7C2O60412 319 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 LOXP28300 417 aaPredicted RBP10.1□□□□□ -0.79
PAAF1-215ENST00000544909 DDTP30046 118 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 PPOXP50336 477 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 LGALS4P56470 323 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 TGIF2LXQ8IUE1 241 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 Q8NA96 180 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 ZNF503Q96F45 646 aa10.1□□□□□ -0.79
PAAF1-215ENST00000544909 LOC400499M0QZD8 3231 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 K7EN84 100 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 IGLV2-23P01705 113 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 RANP62826 216 aaKnown RBP10.09□□□□□ -0.79
PAAF1-215ENST00000544909 CENPWQ5EE01 88 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 MMD2Q8IY49 270 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 BEND2Q8NDZ0 799 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 PRSS33Q8NF86 280 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 RND1Q92730 232 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 RNF5Q99942 180 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
PAAF1-215ENST00000544909 CHRDL1Q9BU40 450 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 DCAF16Q9NXF7 216 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 V9GYV3 84 aa10.09□□□□□ -0.79
PAAF1-215ENST00000544909 SHISA9B4DS77 424 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 CRYGCP07315 174 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 IGHV1-8P0DP01 117 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 CCL3L1P16619 93 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 APOBEC3AP31941 199 aaPredicted RBP10.08□□□□□ -0.8
PAAF1-215ENST00000544909 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 CX3CL1P78423 397 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 Q0VG73 95 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 FBXL19-AS1Q494R0 122 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 FAM231DQ6ZW35 169 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 OR5T1Q8NG75 326 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 FAM167A-AS1Q96KT0 104 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 DYNLRB1Q9NP97 96 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 TNCP24821 2201 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 ZNF292O60281 2723 aa10.08□□□□□ -0.8
PAAF1-215ENST00000544909 GGTLC3B5MD39 225 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 FOXH1O75593 365 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 CHRNB4P30926 498 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 PLA2G5P39877 138 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 REC114Q7Z4M0 266 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 CCL17Q92583 94 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 IGF2BP2-AS1Q96M15 143 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 IGHV1-69-2A0A0G2JMI3 117 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 PGPEP1LA6NFU8 196 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 COX7A2P2O60397 106 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 FCN3O75636 299 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 CASP6P55212 293 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 WT1-ASQ06250 92 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 ZCCHC24Q8N2G6 241 aaKnown RBP10.07□□□□□ -0.8
PAAF1-215ENST00000544909 TMEM116Q8NCL8 245 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
PAAF1-215ENST00000544909 SNRNP40Q96DI7 357 aaKnown RBP10.07□□□□□ -0.8
PAAF1-215ENST00000544909 TRGV9Q99603 122 aa10.07□□□□□ -0.8
PAAF1-215ENST00000544909 K7ENP7 123 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 ACTL6BO94805 426 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 MYOD1P15172 320 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 CRYBB3P26998 211 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 PRRX1P54821 245 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 PLP1P60201 277 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 UBE2L3P68036 154 aaKnown RBP10.06□□□□□ -0.8
PAAF1-215ENST00000544909 C10orf113Q5VZT2 155 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 CDPF1Q6NVV7 123 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 DMRTC2Q8IXT2 367 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-215ENST00000544909 OR10W1Q8NGF6 305 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 C8orf46Q8TAG6 207 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 RBM14Q96PK6 669 aaKnown RBP10.06□□□□□ -0.8
PAAF1-215ENST00000544909 SLC25A2Q9BXI2 301 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 CTSZQ9UBR2 303 aa10.06□□□□□ -0.8
PAAF1-215ENST00000544909 AMMECR1Q9Y4X0 333 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-215ENST00000544909 SMIM27A0A1W2PRY6 76 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 CGB1A6NKQ9 187 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 A8MWP6 167 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 IGLV1-47P01700 117 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 TPPP2P59282 170 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 RAB4BP61018 213 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 OR10J3Q5JRS4 329 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 C9orf152Q5JTZ5 239 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 MRPL52Q86TS9 123 aaKnown RBP10.05□□□□□ -0.8
PAAF1-215ENST00000544909 WIPF2Q8TF74 440 aaPredicted RBP10.05□□□□□ -0.8
PAAF1-215ENST00000544909 WFIKKN1Q96NZ8 548 aa10.05□□□□□ -0.8
PAAF1-215ENST00000544909 RALYQ9UKM9 306 aaKnown RBP10.05□□□□□ -0.8
PAAF1-215ENST00000544909 E7EQL1 145 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms