RNA–Protein interactions for RNA: ENST00000543615.1

FAM60A-208, Transcript of Protein FAM60A, human

TSL 5

Gene FAM60A, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM60A-208	ENST00000543615	TP53TG1	Q9Y2A0	90 aa		13.49	□□□□□ -0.25
FAM60A-208	ENST00000543615	IGHV3-35	A0A0C4DH35	117 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	LCE6A	A0A183	80 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	UBE2C	O00762	179 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	RGS5	O15539	181 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	SNCA	P37840	140 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	NPBWR1	P48145	328 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	SMIM4	Q8WVI0	70 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	RRNAD1	Q96FB5	475 aa	Known RBP	13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	C20orf24	Q9BUV8	137 aa		13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	NXF2	Q9GZY0	626 aa	Known RBP	13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	CCDC59	Q9P031	241 aa	Known RBP	13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	C14orf166	Q9Y224	244 aa	Known RBP	13.48	□□□□□ -0.25
FAM60A-208	ENST00000543615	KIR2DL5B	A0A0G2JN68	375 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	KIR2DL5B	A0A0G2JPC4	375 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	DISC1	C4P0D8	188 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	GNG7	O60262	68 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	PPP5C	P53041	499 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	TMBIM6	P55061	237 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	KIR2DL5A	Q8N109	375 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	KIR2DL5B	Q8NHK3	375 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	TP53RK	Q96S44	253 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	SMPX	Q9UHP9	88 aa		13.47	□□□□□ -0.25
FAM60A-208	ENST00000543615	RYR3	Q15413	4870 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	MT-CO2	P00403	227 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	IGKV1-5	P01602	117 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	TRIM16L	Q309B1	348 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	SCGB2B2	Q4G0G5	96 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	AARD	Q4LEZ3	155 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	RNASE12	Q5GAN4	147 aa	Known RBP	13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	PVRIG	Q6DKI7	326 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615		Q6ZWC4	215 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	WFDC3	Q8IUB2	231 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	DUSP18	Q8NEJ0	188 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	OR13C8	Q8NGS7	320 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	MIXL1	Q9H2W2	232 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	ENY2	Q9NPA8	101 aa		13.46	□□□□□ -0.25
FAM60A-208	ENST00000543615	IGHV3-21	A0A0B4J1V1	117 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	IGHV7-4-1	A0A0J9YVY3	117 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	IFNA17	P01571	189 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	AKAIN1	P0CW23	69 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	DHODH	Q02127	395 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	ZFAND6	Q6FIF0	208 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	RNASE11	Q8TAA1	199 aa	Known RBP	13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	PRRT1	Q99946	306 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	TMEM222	Q9H0R3	208 aa		13.45	□□□□□ -0.26
FAM60A-208	ENST00000543615	TRAV14DV4	A0A0A6YYC5	116 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	PIGBOS1	A0A0B4J2F0	54 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	ST8SIA3	O43173	380 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	NOL3	O60936	208 aa	Known RBP	13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	CDS2	O95674	445 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	PI3	P19957	117 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	RPL5	P46777	297 aa	Known RBP	13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	TMEM116	Q8NCL8	245 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	OR52E5	Q8NH55	327 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	MARCH1	Q8TCQ1	289 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	PINX1	Q96BK5	328 aa	Known RBP	13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	GALNT14	Q96FL9	552 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	SCGB3A2	Q96PL1	93 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	TMEM231	Q9H6L2	316 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	RETN	Q9HD89	108 aa		13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615	RSL24D1	Q9UHA3	163 aa	Known RBP	13.44	□□□□□ -0.26
FAM60A-208	ENST00000543615		A0A0B4J293	547 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	CHEK1	O14757	476 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	ATF4	P18848	351 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	HOXA1	P49639	335 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	SPCS3	P61009	180 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	SPCS2	Q15005	226 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	ZNF600	Q6ZNG1	722 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	OR4D10	Q8NGI6	311 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	DYNC2LI1	Q8TCX1	351 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	RBPMS	Q93062	196 aa	Known RBP	13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	DIRAS2	Q96HU8	199 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	RHPN1-AS1	Q9BWJ2	59 aa		13.43	□□□□□ -0.26
FAM60A-208	ENST00000543615	TRAV2	A0A0B4J234	112 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	CTDSP2	O14595	271 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	GSTZ1	O43708	216 aa	Predicted RBP	13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	JTB	O76095	146 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	YIF1A	O95070	293 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	PAFAH1B2	P68402	229 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	IL18	Q14116	193 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	ODF3L2	Q3SX64	289 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	OVOL2	Q9BRP0	275 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	NAA60	Q9H7X0	242 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	TENM2	Q9NT68	2774 aa		13.42	□□□□□ -0.26
FAM60A-208	ENST00000543615	CSMD3	Q7Z407	3707 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	TRAV30	A0A087WSZ9	112 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	RNASE2	P10153	161 aa	Known RBP	13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	HTR2B	P41595	481 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	BSX	Q3C1V8	233 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	STPG3	Q8N7X2	389 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	IL22RA2	Q969J5	263 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	RNF2	Q99496	336 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	SCP2D1	Q9UJQ7	156 aa		13.41	□□□□□ -0.26
FAM60A-208	ENST00000543615	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 172 ms