RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 STEAP1BQ6NZ63 245 aa15.11■□□□□ 0.01
DDB1-220ENST00000542337 TP53RKQ96S44 253 aa15.11■□□□□ 0.01
DDB1-220ENST00000542337 ENY2Q9NPA8 101 aa15.11■□□□□ 0.01
DDB1-220ENST00000542337 LCE6AA0A183 80 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 CD74P04233 296 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 NPBWR1P48145 328 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 APOC4P55056 127 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 TMEM116Q8NCL8 245 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 DUSP18Q8NEJ0 188 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 RABL2AQ9UBK7 228 aaPredicted RBP15.1■□□□□ 0.01
DDB1-220ENST00000542337 SMPXQ9UHP9 88 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 RABL2BQ9UNT1 228 aa15.1■□□□□ 0.01
DDB1-220ENST00000542337 DISC1C4P0D8 188 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 IGKV1-5P01602 117 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 CTSDP07339 412 aaPredicted RBP15.09■□□□□ 0.01
DDB1-220ENST00000542337 BMI1P35226 326 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 ALDH3B2P48448 385 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 CMC4P56277 68 aaPredicted RBP15.09■□□□□ 0.01
DDB1-220ENST00000542337 IZUMO4Q1ZYL8 232 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 SPINK9Q5DT21 86 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 OR4D10Q8NGI6 311 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 OR13C8Q8NGS7 320 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 NXF2Q9GZY0 626 aaKnown RBP15.09■□□□□ 0.01
DDB1-220ENST00000542337 UBQLN2Q9UHD9 624 aa15.09■□□□□ 0.01
DDB1-220ENST00000542337 C14orf166Q9Y224 244 aaKnown RBP15.09■□□□□ 0.01
DDB1-220ENST00000542337 TRAV14DV4A0A0A6YYC5 116 aa15.08■□□□□ 0
DDB1-220ENST00000542337 A0A0B4J293 547 aa15.08■□□□□ 0
DDB1-220ENST00000542337 IGHV7-4-1A0A0J9YVY3 117 aa15.08■□□□□ 0
DDB1-220ENST00000542337 CORTO00230 105 aa15.08■□□□□ 0
DDB1-220ENST00000542337 CTDSP2O14595 271 aa15.08■□□□□ 0
DDB1-220ENST00000542337 ST8SIA3O43173 380 aa15.08■□□□□ 0
DDB1-220ENST00000542337 IGHV3-48P01763 117 aa15.08■□□□□ 0
DDB1-220ENST00000542337 HOXA1P49639 335 aaPredicted RBP15.08■□□□□ 0
DDB1-220ENST00000542337 SP6Q3SY56 376 aa15.08■□□□□ 0
DDB1-220ENST00000542337 CLVS1Q8IUQ0 354 aaPredicted RBP15.08■□□□□ 0
DDB1-220ENST00000542337 MARCH1Q8TCQ1 289 aa15.08■□□□□ 0
DDB1-220ENST00000542337 GINS3Q9BRX5 216 aa15.08■□□□□ 0
DDB1-220ENST00000542337 RHPN1-AS1Q9BWJ2 59 aa15.08■□□□□ 0
DDB1-220ENST00000542337 C6orf62Q9GZU0 229 aaPredicted RBP15.08■□□□□ 0
DDB1-220ENST00000542337 MIXL1Q9H2W2 232 aa15.08■□□□□ 0
DDB1-220ENST00000542337 TEX13DA0A0J9YY54 714 aaPredicted RBP15.07■□□□□ 0
DDB1-220ENST00000542337 INS-IGF2F8WCM5 200 aa15.07■□□□□ 0
DDB1-220ENST00000542337 UBE2CO00762 179 aa15.07■□□□□ 0
DDB1-220ENST00000542337 UCP1P25874 307 aa15.07■□□□□ 0
DDB1-220ENST00000542337 SPCS2Q15005 226 aa15.07■□□□□ 0
DDB1-220ENST00000542337 RAB2BQ8WUD1 216 aa15.07■□□□□ 0
DDB1-220ENST00000542337 DIRAS2Q96HU8 199 aa15.07■□□□□ 0
DDB1-220ENST00000542337 OR10C1Q96KK4 312 aa15.07■□□□□ 0
DDB1-220ENST00000542337 OVOL2Q9BRP0 275 aa15.07■□□□□ 0
DDB1-220ENST00000542337 TENM2Q9NT68 2774 aa15.06■□□□□ 0
DDB1-220ENST00000542337 CHEK1O14757 476 aa15.06■□□□□ 0
DDB1-220ENST00000542337 NOL3O60936 208 aaKnown RBP15.06■□□□□ 0
DDB1-220ENST00000542337 SCGB2A1O75556 95 aa15.06■□□□□ 0
DDB1-220ENST00000542337 CD5P06127 495 aa15.06■□□□□ 0
DDB1-220ENST00000542337 ETV6P41212 452 aa15.06■□□□□ 0
DDB1-220ENST00000542337 IL18Q14116 193 aa15.06■□□□□ 0
DDB1-220ENST00000542337 FAM219AQ8IW50 185 aa15.06■□□□□ 0
DDB1-220ENST00000542337 STPG3Q8N7X2 389 aa15.06■□□□□ 0
DDB1-220ENST00000542337 RNF2Q99496 336 aa15.06■□□□□ 0
DDB1-220ENST00000542337 JTBO76095 146 aa15.05■□□□□ -0
DDB1-220ENST00000542337 P0C879 139 aa15.05■□□□□ -0
DDB1-220ENST00000542337 PAFAH1B2P68402 229 aa15.05■□□□□ -0
DDB1-220ENST00000542337 SURF2Q15527 256 aaPredicted RBP15.05■□□□□ -0
DDB1-220ENST00000542337 Q6ZWC4 215 aa15.05■□□□□ -0
DDB1-220ENST00000542337 SMIM4Q8WVI0 70 aa15.05■□□□□ -0
DDB1-220ENST00000542337 BCL7BQ9BQE9 202 aa15.05■□□□□ -0
DDB1-220ENST00000542337 TP53TG1Q9Y2A0 90 aa15.05■□□□□ -0
DDB1-220ENST00000542337 DYNC2H1Q8NCM8 4307 aaKnown RBP15.05■□□□□ -0
DDB1-220ENST00000542337 IGHV3-49A0A0A0MS15 119 aa15.04■□□□□ -0
DDB1-220ENST00000542337 KIR2DL5BA0A0G2JN68 375 aa15.04■□□□□ -0
DDB1-220ENST00000542337 KIR2DL5BA0A0G2JPC4 375 aa15.04■□□□□ -0
DDB1-220ENST00000542337 CTDSPLO15194 276 aa15.04■□□□□ -0
DDB1-220ENST00000542337 AKAIN1P0CW23 69 aa15.04■□□□□ -0
DDB1-220ENST00000542337 TMBIM6P55061 237 aa15.04■□□□□ -0
DDB1-220ENST00000542337 DHODHQ02127 395 aa15.04■□□□□ -0
DDB1-220ENST00000542337 KIR2DL5AQ8N109 375 aa15.04■□□□□ -0
DDB1-220ENST00000542337 KIR2DL5BQ8NHK3 375 aa15.04■□□□□ -0
DDB1-220ENST00000542337 GALNT14Q96FL9 552 aa15.04■□□□□ -0
DDB1-220ENST00000542337 PRRT1Q99946 306 aa15.04■□□□□ -0
DDB1-220ENST00000542337 TMEM222Q9H0R3 208 aa15.04■□□□□ -0
DDB1-220ENST00000542337 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.04■□□□□ -0
DDB1-220ENST00000542337 CCDC59Q9P031 241 aaKnown RBP15.04■□□□□ -0
DDB1-220ENST00000542337 SPRY2O43597 315 aa15.03■□□□□ -0
DDB1-220ENST00000542337 CDS2O95674 445 aa15.03■□□□□ -0
DDB1-220ENST00000542337 OR5AC1P0C628 307 aa15.03■□□□□ -0
DDB1-220ENST00000542337 SPCS3P61009 180 aa15.03■□□□□ -0
DDB1-220ENST00000542337 ODF3L2Q3SX64 289 aa15.03■□□□□ -0
DDB1-220ENST00000542337 TOMM20LQ6UXN7 152 aa15.03■□□□□ -0
DDB1-220ENST00000542337 ZNF600Q6ZNG1 722 aa15.03■□□□□ -0
DDB1-220ENST00000542337 NAA60Q9H7X0 242 aa15.03■□□□□ -0
DDB1-220ENST00000542337 TMEM50AO95807 157 aa15.02■□□□□ -0
DDB1-220ENST00000542337 RNASE2P10153 161 aaKnown RBP15.02■□□□□ -0
DDB1-220ENST00000542337 OPRK1P41145 380 aa15.02■□□□□ -0
DDB1-220ENST00000542337 TFPI2P48307 235 aa15.02■□□□□ -0
DDB1-220ENST00000542337 FAAP20Q6NZ36 180 aa15.02■□□□□ -0
DDB1-220ENST00000542337 RBPMSQ93062 196 aaKnown RBP15.02■□□□□ -0
DDB1-220ENST00000542337 SCGB3A2Q96PL1 93 aa15.02■□□□□ -0
DDB1-220ENST00000542337 RTBDNQ9BSG5 229 aaPredicted RBP15.02■□□□□ -0
DDB1-220ENST00000542337 TMEM231Q9H6L2 316 aa15.02■□□□□ -0
DDB1-220ENST00000542337 RSL24D1Q9UHA3 163 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms