RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 ZNF331Q9NQX6 463 aaPredicted RBP5.55□□□□□ -1.52
NKRF-204ENST00000542113 TEX50A0A1B0GTY4 177 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 SNRPCP09234 159 aaKnown RBP5.55□□□□□ -1.52
NKRF-204ENST00000542113 CT45A6P0DMU7 189 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 CT45A5P0DMU8 189 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 CT45A7P0DMV0 189 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 PLA2G5P39877 138 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 RPL8P62917 257 aaKnown RBP5.55□□□□□ -1.52
NKRF-204ENST00000542113 UBE2L3P68036 154 aaKnown RBP5.55□□□□□ -1.52
NKRF-204ENST00000542113 TMEM177Q53S58 311 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 FAM162BQ5T6X4 162 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 PIP4P1Q86T03 277 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 NUP37Q8NFH4 326 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 C22orf15Q8WYQ4 148 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 SMIM12Q96EX1 92 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 KCNS1Q96KK3 526 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 HARBI1Q96MB7 349 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 CBLN4Q9NTU7 201 aa5.55□□□□□ -1.52
NKRF-204ENST00000542113 HCFC1P51610 2035 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 VSTM5A8MXK1 200 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 EREGO14944 169 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 COX7A2P2O60397 106 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 FOXH1O75593 365 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 IGHV1-46P01743 117 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 SAA1P0DJI8 122 aaPredicted RBP5.54□□□□□ -1.52
NKRF-204ENST00000542113 PRSS8Q16651 343 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 MSMPQ1L6U9 139 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 KRTCAP3Q53RY4 240 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 TPTE2P1Q5T6R2 138 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 ETFRF1Q6IPR1 90 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 IGFL3Q6UXB1 125 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 ZNF705AQ6ZN79 300 aaPredicted RBP5.54□□□□□ -1.52
NKRF-204ENST00000542113 FAM231DQ6ZW35 169 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 PDPNQ86YL7 162 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 C8orf31Q8N9H6 132 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 LEAP2Q969E1 77 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 ZNF430Q9H8G1 570 aaPredicted RBP5.54□□□□□ -1.52
NKRF-204ENST00000542113 DNAJC4Q9NNZ3 241 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 ASCL3Q9NQ33 180 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 CACNA1HO95180 2353 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 SMIM27A0A1W2PRY6 76 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 IZUMO1RA6ND01 250 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 RPLP1P05386 114 aaKnown RBP5.54□□□□□ -1.52
NKRF-204ENST00000542113 FTH1P19P0C7X4 201 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 MGST1P10620 155 aaKnown RBP5.54□□□□□ -1.52
NKRF-204ENST00000542113 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
NKRF-204ENST00000542113 DEFB109BQ30KR1 87 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 ALKBH2Q6NS38 261 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 C19orf35Q6ZS72 473 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 Q6ZWC4 215 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 OR4C13Q8NGP0 309 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 FLYWCH2Q96CP2 140 aaKnown RBP5.54□□□□□ -1.52
NKRF-204ENST00000542113 WFIKKN1Q96NZ8 548 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 CCL13Q99616 98 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 SNHG12Q9BXW3 62 aa5.54□□□□□ -1.52
NKRF-204ENST00000542113 TDGF1P3P51864 188 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 ZNF474Q6S9Z5 364 aaPredicted RBP5.53□□□□□ -1.52
NKRF-204ENST00000542113 TMEM108Q6UXF1 575 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 ASCL5Q7RTU5 278 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 TMEM167AQ8TBQ9 72 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 WIPF2Q8TF74 440 aaPredicted RBP5.53□□□□□ -1.52
NKRF-204ENST00000542113 TMEM186Q96B77 213 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 IGF2BP2-AS1Q96M15 143 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 NEU1Q99519 415 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 NDUFA4L2Q9NRX3 87 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 SERTAD4Q9NUC0 356 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 MRPL27Q9P0M9 148 aaKnown RBP5.53□□□□□ -1.52
NKRF-204ENST00000542113 RELNP78509 3460 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 CADP27708 2225 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 GGTLC3B5MD39 225 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 ZNF253O75346 499 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 GPX1P07203 203 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 SELLP14151 372 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 AMTP48728 403 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 OR5I1Q13606 314 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 VMA21Q3ZAQ7 101 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 C10orf113Q5VZT2 155 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 TMEM136Q6ZRR5 245 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 C1orf229Q6ZS94 237 aaPredicted RBP5.53□□□□□ -1.52
NKRF-204ENST00000542113 SEM1Q6ZVN7 128 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 DOLPP1Q86YN1 238 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 KLHDC1Q8N7A1 406 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 DEFB108BQ8NET1 73 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 OR5AN1Q8NGI8 311 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 TP53TG3Q9ULZ0 132 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 SSUH2Q9Y2M2 353 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 PTPRZ1P23471 2315 aaPredicted RBP5.53□□□□□ -1.52
NKRF-204ENST00000542113 A0A1B0GUS0 222 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 NUPR1O60356 82 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 APCSP02743 223 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 HIST1H1EP10412 219 aaKnown RBP5.53□□□□□ -1.52
NKRF-204ENST00000542113 CD40P25942 277 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 ATP5L2Q7Z4Y8 100 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 LINC00311Q8N616 119 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 FAM216BQ8N7L0 139 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 ST6GALNAC3Q8NDV1 305 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 OR10X1Q8NGY0 326 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 GRAMD2BQ96HH9 432 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 PAXXQ9BUH6 204 aa5.53□□□□□ -1.52
NKRF-204ENST00000542113 GNB4Q9HAV0 340 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 383.9 ms