RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SAA2P0DJI9 122 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-208ENST00000542068 ZNF474Q6S9Z5 364 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-208ENST00000542068 ERASQ7Z444 233 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 OR10W1Q8NGF6 305 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 FAM168AQ92567 244 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 CALYQ9NYX4 217 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 DKK4Q9UBT3 224 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 TANC2Q9HCD6 1990 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 CAMPP49913 170 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
CNOT9-208ENST00000542068 J3QR06 171 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 YPEL1O60688 119 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 IGHG3P01860 377 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 APELAP0DMC3 54 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 MRPS11P82912 194 aaKnown RBP12.55□□□□□ -0.4
CNOT9-208ENST00000542068 TEX43Q6ZNM6 134 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 C22orf34Q6ZV56 151 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 OR4S2Q8NH73 311 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 CCL17Q92583 94 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 YPEL2Q96QA6 119 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 GPX1P07203 203 aa12.55□□□□□ -0.4
CNOT9-208ENST00000542068 SSBP4Q9BWG4 385 aaPredicted RBP12.55□□□□□ -0.4
CNOT9-208ENST00000542068 PRSS46E5RG02 174 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 SIAH2O43255 324 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 HINT1P49773 126 aaPredicted RBP12.54□□□□□ -0.4
CNOT9-208ENST00000542068 HSPE1P61604 102 aaKnown RBP12.54□□□□□ -0.4
CNOT9-208ENST00000542068 GGTLC3B5MD39 225 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 MGST3O14880 152 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 SELENOTP62341 195 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 IBA57Q5T440 356 aaKnown RBP12.54□□□□□ -0.4
CNOT9-208ENST00000542068 MORN5Q5VZ52 161 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 LSM4Q9Y4Z0 139 aaKnown RBP12.54□□□□□ -0.4
CNOT9-208ENST00000542068 IGKV1OR2-108A0A075B7D4 117 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 RAB7AP51149 207 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 SEM1Q6ZVN7 128 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 TCTEX1D1Q8N7M0 179 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 OR2T6Q8NHC8 308 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 ZNF355PQ9NSJ1 428 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 IL19Q9UHD0 177 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
CNOT9-208ENST00000542068 DSCAMO60469 2012 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 A0A1W2PS18 150 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 MMP23AO75900 390 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 PYYP10082 97 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 USF1P22415 310 aaPredicted RBP12.53□□□□□ -0.4
CNOT9-208ENST00000542068 CD24P25063 80 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 COMPP49747 757 aaPredicted RBP12.53□□□□□ -0.4
CNOT9-208ENST00000542068 PLSCR4Q9NRQ2 329 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 SLC35D1Q9NTN3 355 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 TP73-AS1Q9UF72 201 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 TRGV10A0A0A0MS01 117 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 H3BTX0 84 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 J3QW42 95 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 CHRNB4P30926 498 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 LOXL3P58215 753 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 C20orf144Q9BQM9 153 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 SLC25A15Q9Y619 301 aa12.53□□□□□ -0.4
CNOT9-208ENST00000542068 M0QZK8 103 aa12.52□□□□□ -0.4
CNOT9-208ENST00000542068 HNRNPA3P51991 378 aaKnown RBP12.52□□□□□ -0.4
CNOT9-208ENST00000542068 Q56UQ5 140 aa12.52□□□□□ -0.4
CNOT9-208ENST00000542068 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.4
CNOT9-208ENST00000542068 IDI2-AS1Q9NZ38 188 aa12.52□□□□□ -0.4
CNOT9-208ENST00000542068 JPT1Q9UK76 154 aa12.52□□□□□ -0.4
CNOT9-208ENST00000542068 ZNF891A8MT65 544 aaPredicted RBP12.52□□□□□ -0.41
CNOT9-208ENST00000542068 LINC00869P0C866 280 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 MFAP2P55001 183 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 UBE2L3P68036 154 aaKnown RBP12.52□□□□□ -0.41
CNOT9-208ENST00000542068 PRR7Q8TB68 274 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 BORCS7Q96B45 105 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.41
CNOT9-208ENST00000542068 SLC45A2Q9UMX9 530 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
CNOT9-208ENST00000542068 A0A1W2PN81 502 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 BMPR1BO00238 502 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 C3orf79P0CE67 100 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 MZT1Q08AG7 82 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 TMEM136Q6ZRR5 245 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 STPG4Q8N801 248 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 DNAJC4Q9NNZ3 241 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.41
CNOT9-208ENST00000542068 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.41
CNOT9-208ENST00000542068 DYSFO75923 2080 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 SRRM4A7MD48 611 aaKnown RBP12.51□□□□□ -0.41
CNOT9-208ENST00000542068 SRRM5B3KS81 715 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 APCSP02743 223 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
CNOT9-208ENST00000542068 ZNF503Q96F45 646 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
CNOT9-208ENST00000542068 IGHV3-21A0A0B4J1V1 117 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 A0A1B0GWJ7 208 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 H0Y8G0 127 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 SSBP2P81877 361 aaPredicted RBP12.51□□□□□ -0.41
CNOT9-208ENST00000542068 SLAQ13239 276 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 FAM90A1Q86YD7 464 aa12.51□□□□□ -0.41
CNOT9-208ENST00000542068 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms