RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 CD24P25063 80 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 DUTP33316 252 aaKnown RBP12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 TBR1Q16650 682 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 RPL39P5Q59GN2 51 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 Q8IYB0 196 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 OR52E5Q8NH55 327 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 DEFB127Q9H1M4 99 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 TNFRSF19Q9NS68 423 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 SELENOKQ9Y6D0 94 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 DYSFO75923 2080 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 ISLRO14498 428 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 MFAP2P55001 183 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 TMPRSS3P57727 454 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 RNFT1Q5M7Z0 435 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 LINC00173Q6ZV60 143 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 MDP1Q86V88 176 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 ZNF355PQ9NSJ1 428 aa12.19□□□□□ -0.46
AC005840.4-201ENST00000541242 MUC21A0A0G2JKD1 596 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 MUC21A0A140T8X8 626 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 LINC00869P0C866 280 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 LRRC10Q5BKY1 277 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 MCRIP2Q9BUT9 160 aaKnown RBP12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 MRPL27Q9P0M9 148 aaKnown RBP12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 TCF19Q9Y242 345 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 ARL2-SNX15V9GYD0 113 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 CFAP47Q6ZTR5 3102 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 ARFGEF3Q5TH69 2177 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 NPY1RP25929 384 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 GPR12P47775 334 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 CAMPP49913 170 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
AC005840.4-201ENST00000541242 OR4C46A6NHA9 309 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 M0R1X1 148 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 RHOGP84095 191 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 EDDM3AQ14507 147 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 SLC35E4Q6ICL7 350 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 IGF2BP2-AS1Q96M15 143 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 NABP2Q9BQ15 211 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 PLEKHA3Q9HB20 300 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 TMEM140Q9NV12 185 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 KLF13Q9Y2Y9 288 aaPredicted RBP12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 ZFHX4Q86UP3 3567 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 EP300Q09472 2414 aaPredicted RBP12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 PRR20EP86478 221 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 PRR20CP86479 221 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 PRR20DP86480 221 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 PRR20BP86481 221 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 PRR20AP86496 221 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 COX19Q49B96 90 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 ZNF766Q5HY98 468 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 OR2T6Q8NHC8 308 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 URB1-AS1Q96HZ7 61 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 FER1L6-AS2Q96M78 137 aa12.17□□□□□ -0.46
AC005840.4-201ENST00000541242 UTF1Q5T230 341 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 SPRR3Q9UBC9 169 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 KLRC4-KLRK1H3BQV0 150 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 CORTO00230 105 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 TCF15Q12870 199 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 BVES-AS1Q5T3Y7 98 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 PRR27Q6MZM9 219 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 ZNF841Q6ZN19 808 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 WDR31Q8NA23 367 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 NUP35Q8NFH5 326 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 BCL2L2Q92843 193 aaPredicted RBP12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 CSTL1Q9H114 145 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
AC005840.4-201ENST00000541242 IGKV1OR2-108A0A075B7D4 117 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 PPOXP50336 477 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 CUL9Q8IWT3 2517 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 TMEM238C9JI98 176 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 ERVK-16P61578 105 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 FOXE3Q13461 319 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 MLANAQ16655 118 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 MORN5Q5VZ52 161 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 PRSS33Q8NF86 280 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 SVIPQ8NHG7 77 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 SLC25A40Q8TBP6 338 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 TMEM70Q9BUB7 260 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 OBP2BQ9NPH6 170 aa12.15□□□□□ -0.46
AC005840.4-201ENST00000541242 TRAV5A0A0B4J249 113 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 FOXA3P55318 350 aaPredicted RBP12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 SNRNP40Q96DI7 357 aaKnown RBP12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 TMEM167BQ9NRX6 74 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 SPENQ96T58 3664 aaKnown RBP12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 VWC2LB2RUY7 222 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 H0Y8G0 127 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 SMPD2O60906 423 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 CD46P15529 392 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 ZNF134P52741 427 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 RAB31Q13636 194 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 FAM120AOSQ5T036 256 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
AC005840.4-201ENST00000541242 C11orf53Q8IXP5 236 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms