RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 Q6ZRG5 221 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 THNSL2Q86YJ6 484 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 C11orf42Q8N5U0 333 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 FAM213BQ8TBF2 198 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 RNASEH2CQ8TDP1 164 aaKnown RBP6.7□□□□□ -1.34
CHD4-208ENST00000540960 CXorf58Q96LI9 332 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 HRH4Q9H3N8 390 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 WFDC1Q9HC57 220 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 NPVFQ9HCQ7 196 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 C1RLQ9NZP8 487 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 KIAA1456Q9P272 454 aa6.7□□□□□ -1.34
CHD4-208ENST00000540960 TET2Q6N021 2002 aaPredicted RBP6.69□□□□□ -1.34
CHD4-208ENST00000540960 TRAV20A0A0B4J274 112 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 IGHV1-3A0A0C4DH29 117 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 H3BP45 60 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 NXPH3O95157 252 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 MT-CO2P00403 227 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 IGHV3-7P01780 117 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 OPN1MWP04001 364 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 SAA1P0DJI8 122 aaPredicted RBP6.69□□□□□ -1.34
CHD4-208ENST00000540960 OPN1MW2P0DN77 364 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 OPN1MW3P0DN78 364 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 GATA3P23771 443 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 BRS3P32247 399 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 LMO4P61968 165 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 IZUMO4Q1ZYL8 232 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 C2orf83Q53S99 150 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 TMEM41BQ5BJD5 291 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 DEFB121Q5J5C9 76 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 TPTE2P1Q5T6R2 138 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 MOB3BQ86TA1 216 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 SVBPQ8N300 66 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 PNKDQ8N490 385 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 MALSU1Q96EH3 234 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 NARS2Q96I59 477 aaKnown RBP6.69□□□□□ -1.34
CHD4-208ENST00000540960 OR4C12Q96R67 309 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 TBX15Q96SF7 602 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 ACTR3CQ9C0K3 210 aaPredicted RBP6.69□□□□□ -1.34
CHD4-208ENST00000540960 TREM1Q9NP99 234 aa6.69□□□□□ -1.34
CHD4-208ENST00000540960 IGHV2-70DA0A0C4DH43 119 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 TEX50A0A1B0GTY4 177 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 A0A1B0GUS0 222 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 TMEM218A2RU14 115 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 CLPSL1A2RUU4 121 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 FAM181BA6NEQ2 426 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 C15orf62A8K5M9 175 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 RNASEK-C17orf49H0YIS7 233 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 LY6LH3BQJ8 138 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 CLDN34H7C241 214 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 SCGB2A1O75556 95 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 FABP1P07148 127 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 SNRNP70P08621 437 aaKnown RBP6.68□□□□□ -1.34
CHD4-208ENST00000540960 FAM106CPP0CH98 169 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 FGF7P21781 194 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 COX7A1P24310 79 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 OPRK1P41145 380 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 UBE2E1P51965 193 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 ARF6P62330 175 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 TOR2AQ5JU69 321 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 DMRTA1Q5VZB9 504 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 FAM53AQ6NSI3 398 aaPredicted RBP6.68□□□□□ -1.34
CHD4-208ENST00000540960 TMEM182Q6ZP80 229 aaPredicted RBP6.68□□□□□ -1.34
CHD4-208ENST00000540960 S100A7AQ86SG5 101 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 TEX29Q8N6K0 151 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 OR2T10Q8NGZ9 312 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 MBD3L1Q8WWY6 194 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 TMEM190Q8WZ59 177 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 RNF2Q99496 336 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 TXNDC17Q9BRA2 123 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 HINT2Q9BX68 163 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 NDUFA4L2Q9NRX3 87 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 WDR83OSQ9Y284 106 aa6.68□□□□□ -1.34
CHD4-208ENST00000540960 UBE2L5PA0A1B0GUS4 154 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 ODF3BA8MYP8 253 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 C22orf46C9J442 243 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 TOX4O94842 621 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 SNAPINO95295 136 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 MOSP00540 346 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 IGKV1-16P04430 117 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 M6PRP20645 277 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 S100A7P31151 101 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 BPIFB3P59826 476 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 CD69Q07108 199 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 HABP2Q14520 560 aaPredicted RBP6.67□□□□□ -1.34
CHD4-208ENST00000540960 PLGLAQ15195 96 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 SSX2Q16385 188 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 PRSS8Q16651 343 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 TEPPQ6URK8 271 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 VKORC1L1Q8N0U8 176 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 OR4P4Q8NGL7 312 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 OR4F5Q8NH21 305 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 SFT2D1Q8WV19 159 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 SLC35E1Q96K37 410 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 EIF5A2Q9GZV4 153 aaKnown RBP6.67□□□□□ -1.34
CHD4-208ENST00000540960 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 SLC39A9Q9NUM3 307 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 RNF24Q9Y225 148 aa6.67□□□□□ -1.34
CHD4-208ENST00000540960 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms