RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PDE6D	O43924	150 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CD1B	P29016	333 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	YPEL3	P61236	119 aa	Predicted RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	HTD2	P86397	168 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	EDDM3A	Q14507	147 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TMEM30B	Q3MIR4	351 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		Q6P435	159 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TP73-AS1	Q9UF72	201 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	NAT8B	Q9UHF3	227 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	NAV3	Q8IVL0	2385 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DOPEY2	Q9Y3R5	2298 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	C17orf112	F2Z3M2	114 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ACTL6B	O94805	426 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GATA3	P23771	443 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	HNRNPA3	P51991	378 aa	Known RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RPL31	P62899	125 aa	Known RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	AES	Q08117	197 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ATP6V1F	Q16864	119 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MRPL54	Q6P161	138 aa	Known RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		Q8N7P7	452 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	NRN1	Q9NPD7	142 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ZNF586	Q9NXT0	402 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ZNF292	O60281	2723 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OOEP	A6NGQ2	149 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	C15orf62	A8K5M9	175 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TMPRSS2	O15393	492 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	HYPM	O75409	117 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GPX1	P07203	203 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RAN	P62826	216 aa	Known RBP	4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PRSS57	Q6UWY2	283 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MMD2	Q8IY49	270 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ABHD12	Q8N2K0	398 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ZNF418	Q8TF45	676 aa	Predicted RBP	4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RNASE7	Q9H1E1	156 aa	Known RBP	4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	YAE1D1	Q9NRH1	226 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	KCNIP2	Q9NS61	270 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RNF24	Q9Y225	148 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SETX	Q7Z333	2677 aa	Known RBP	4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DOPEY1	Q5JWR5	2465 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LINC00473	A8K010	186 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		B4DSR2	109 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	WNT9B	O14905	357 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PSPN	O60542	156 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ZNF253	O75346	499 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	COL8A1	P27658	744 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PRRX1	P54821	245 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SELENOT	P62341	195 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ZNF826P	Q6ZT77	177 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DTX2	Q86UW9	622 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		Q8N976	141 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MRGPRD	Q8TDS7	321 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DCTN5	Q9BTE1	182 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SEPSECS	Q9HD40	501 aa	Known RBP	4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IL36B	Q9NZH7	164 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ONECUT1	Q9UBC0	465 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LAMTOR2	Q9Y2Q5	125 aa		4.65	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SMAD7	O15105	426 aa	Known RBP	4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CD99	P14209	185 aa		4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GRN	P28799	593 aa	Known RBP	4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TMEM155	Q4W5P6	130 aa		4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PRAMEF6	Q5VXH4	476 aa		4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF497	Q6ZNH5	498 aa		4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	WDR86	Q86TI4	376 aa		4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HEYL	Q9NQ87	328 aa	Predicted RBP	4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SERTAD4	Q9NUC0	356 aa		4.65	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LOC105371242	A0A075B767	164 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TRBV6-6	A0A0A6YYG2	114 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C12orf77	C9JDV5	145 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	FAM90A26	D6RGX4	464 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MGST3	O14880	152 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CA1	P00915	261 aa	Predicted RBP	4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IGHV1-46	P01743	117 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR9G9	P0C7N8	305 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MPV17	P39210	176 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PSG11	Q9UQ72	335 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	WDR83OS	Q9Y284	106 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TRAV3	A0A0B4J244	114 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		A0A1W2PS18	150 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HBZ	P02008	142 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C3orf79	P0CE67	100 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IGLC2	P0DOY2	106 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IGLC3	P0DOY3	106 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SRI	P30626	198 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SSTR5	P35346	364 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RBX1	P62877	108 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF645	Q8N7E2	425 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	NHLRC2	Q8NBF2	726 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ST6GALNAC6	Q969X2	333 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GALM	Q96C23	342 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RNF2	Q99496	336 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C2CD3	Q4AC94	2353 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IGLV3-9	A0A075B6K5	115 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RNF212B	A8MTL3	300 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SHISA9	B4DS77	424 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	FCGR3B	O75015	233 aa		4.64	□□□□□ -1.67

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