RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TMEM222Q9H0R3 208 aa6.7□□□□□ -1.34
TRAPPC1-202ENST00000540486 TMEM14BQ9NUH8 114 aa6.7□□□□□ -1.34
TRAPPC1-202ENST00000540486 ZNF257Q9Y2Q1 563 aa6.7□□□□□ -1.34
TRAPPC1-202ENST00000540486 KLK5Q9Y337 293 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC1-202ENST00000540486 OR51B2Q9Y5P1 312 aa6.7□□□□□ -1.34
TRAPPC1-202ENST00000540486 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
TRAPPC1-202ENST00000540486 A0A0G2JLM5 398 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 A0A1B0GVY2 172 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 ANKRD34BA5PLL1 514 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 CXorf65A6NEN9 183 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 C15orf61A6NNL5 157 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 B3GALNT1O75752 331 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 TRBV12-3P01733 135 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 BTCP35070 178 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 SLURP1P55000 103 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 MFAP2P55001 183 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 RHOGP84095 191 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 TRIM16LQ309B1 348 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 SLC25A42Q86VD7 318 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 OR5B3Q8NH48 314 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 GPR146Q96CH1 333 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 TMEM56Q96MV1 263 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 OR4C12Q96R67 309 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 TSC22D3Q99576 134 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 FAM110AQ9BQ89 295 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 SLC25A21Q9BQT8 299 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 SRSF8Q9BRL6 282 aaKnown RBP6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 QTRT1Q9BXR0 403 aaKnown RBP6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 BATF3Q9NR55 127 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 FKBP11Q9NYL4 201 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 PRNDQ9UKY0 176 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 KCNIP3Q9Y2W7 256 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 TMEM56-RWDD3S4R434 201 aa6.69□□□□□ -1.34
TRAPPC1-202ENST00000540486 IGLV11-55A0A075B6I3 123 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 C13orf42A0A1B0GVH6 325 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 NAP1L6A6NFF2 107 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 LINC01619G3V211 115 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 OR13C7P0DN81 318 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 HSPE1P61604 102 aaKnown RBP6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 ATP5G2Q06055 141 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 TMEM268Q5VZI3 342 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 TRIQKQ629K1 86 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 NECAP1Q8NC96 275 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 OR4A16Q8NH70 328 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 HINT2Q9BX68 163 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 RANGRFQ9HD47 186 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 RETNQ9HD89 108 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 PTTG2Q9NZH5 202 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 PEF1Q9UBV8 284 aaKnown RBP6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 FBXL7Q9UJT9 491 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 FLVCR2Q9UPI3 526 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 S4R3C0 116 aa6.68□□□□□ -1.34
TRAPPC1-202ENST00000540486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 FAM223BA6NKX1 122 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 ST8SIA3O43173 380 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 NDUFB6O95139 128 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 DEFA4P12838 97 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 INPP1P49441 399 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 AKR1C2P52895 323 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 PRCDQ00LT1 54 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 PMS2P11Q13670 270 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 KLF5Q13887 457 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 RBMS2Q15434 407 aaKnown RBP6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 C15orf32Q32M92 178 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 ANKRD55Q3KP44 614 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 AARDQ4LEZ3 155 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 TMEM128Q5BJH2 165 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 SPINK9Q5DT21 86 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 THOC7Q6I9Y2 204 aaKnown RBP6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 SLC25A24Q6NUK1 477 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 LINC00322Q6ZN03 302 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 LYZL2Q7Z4W2 148 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 TMED4Q7Z7H5 227 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 FAM223AQ8IWN6 122 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 OR2C3Q8N628 320 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 SLC35G3Q8N808 338 aa6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 RBPMSQ93062 196 aaKnown RBP6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 LSM10Q969L4 123 aaKnown RBP6.67□□□□□ -1.34
TRAPPC1-202ENST00000540486 MFSD2BA6NFX1 497 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 PAX4O43316 350 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 ATG12O94817 140 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 SFT2D2O95562 160 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 IGLV1-51P01701 117 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 IGHV3-23P01764 117 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 IFITM3Q01628 133 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 PPP1R1AQ13522 171 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 EXOSC2Q13868 293 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 NMSQ5H8A3 153 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 IL34Q6ZMJ4 242 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 HSD17B13Q7Z5P4 300 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 FAM219AQ8IW50 185 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 S100ZQ8WXG8 99 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 IL22RA2Q969J5 263 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 CCDC32Q9BV29 185 aa6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 F11RQ9Y624 299 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-202ENST00000540486 FAT2Q9NYQ8 4349 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms