RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 M0QZ24 198 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 F2RL2O00254 374 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 OR5G3P0C626 314 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 YPEL3P61236 119 aaPredicted RBP10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 DDB2Q92466 427 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 JPT1Q9UK76 154 aa10.29□□□□□ -0.76
SFSWAP-208ENST00000539506 DYSFO75923 2080 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 TRAV5A0A0B4J249 113 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 A0A1W2PS18 150 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 H0Y8G0 127 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 NDUFB8O95169 186 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 CXorf1O96002 111 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 LGALS4P56470 323 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 Q56UQ5 140 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 CT45A1Q5HYN5 189 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 FAM169BQ8N8A8 192 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 CT45A3Q8NHU0 189 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 SPTBN2O15020 2390 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 HELTA6NFD8 242 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 GFRA3O60609 400 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 SNRNP40Q96DI7 357 aaKnown RBP10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 ZNF586Q9NXT0 402 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 CALYQ9NYX4 217 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 PCNX1Q96RV3 2341 aa10.28□□□□□ -0.76
SFSWAP-208ENST00000539506 SH2D7A6NKC9 451 aaPredicted RBP10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 C3orf79P0CE67 100 aa10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 CAMPP49913 170 aa10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 GNG4P50150 75 aa10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 COTL1Q14019 142 aa10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 TRAT1Q6PIZ9 186 aa10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 ZC2HC1AQ96GY0 325 aa10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 RPH3ALQ9UNE2 315 aa10.27□□□□□ -0.76
SFSWAP-208ENST00000539506 A8MXE2 369 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 TM4SF5O14894 197 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 CCL25O15444 150 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 HYPMO75409 117 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 MMP23AO75900 390 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 PLAUP00749 431 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 RANP62826 216 aaKnown RBP10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 PAFAH1B2P68402 229 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 Q8N976 141 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 DEFB108BQ8NET1 73 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 SLC35E1Q96K37 410 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 TMEM140Q9NV12 185 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 V9GYV3 84 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 RELNP78509 3460 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 ANKRD11Q6UB99 2663 aaPredicted RBP10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 COL5A1-AS1Q5SY13 56 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 ETFRF1Q6IPR1 90 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 TCF19Q9Y242 345 aa10.27□□□□□ -0.77
SFSWAP-208ENST00000539506 NAV3Q8IVL0 2385 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 SAA2-SAA4A0A096LPE2 208 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 M0QZK8 103 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 CA2P00918 260 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 SAA2P0DJI9 122 aaPredicted RBP10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 KLF3P57682 345 aaPredicted RBP10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 FAM27E3Q08E93 113 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 TIMM23BQ5SRD1 257 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 NCOR1P1Q9H4R4 102 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 DSCAML1Q8TD84 2053 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 GLRXP35754 106 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 MORN5Q5VZ52 161 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 ZADH2Q8N4Q0 377 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 KIR3DL3Q8N743 410 aa10.26□□□□□ -0.77
SFSWAP-208ENST00000539506 CD99P14209 185 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 S100A7P31151 101 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 SLAQ13239 276 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 S1PR3Q99500 378 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 PLEKHA3Q9HB20 300 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 ZFHX2Q9C0A1 2572 aaPredicted RBP10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 H3BTX0 84 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 OPRK1P41145 380 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 TCTAP57738 103 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 SELENOTP62341 195 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 ZNF355PQ9NSJ1 428 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 CLEC5AQ9NY25 188 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 LAMTOR2Q9Y2Q5 125 aa10.25□□□□□ -0.77
SFSWAP-208ENST00000539506 DPRXA6NFQ7 191 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 FAM90A9PA6NNJ1 464 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 BMPR1BO00238 502 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 ERVK-16P61578 105 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 RPL8P62917 257 aaKnown RBP10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 MZT1Q08AG7 82 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 C1orf174Q8IYL3 243 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 OR52E5Q8NH55 327 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 RND1Q92730 232 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 CLEC7AQ9BXN2 247 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 RAI1Q7Z5J4 1906 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 C20orf202A1L168 122 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 IGHV1-46P01743 117 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 TEPPQ6URK8 271 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 FAM216BQ8N7L0 139 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 OR9G1Q8NH87 305 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 FAM222BQ8WU58 562 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 NPVFQ9HCQ7 196 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 SH3BGRL2Q9UJC5 107 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms