RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NUP35Q8NFH5 326 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 CLCF1Q9UBD9 225 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 METRNQ9UJH8 293 aa15.25■□□□□ 0.03
SFSWAP-207ENST00000538548 C21orf140B9A014 251 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 TOX4O94842 621 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 PSG1P11464 419 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 CA7P43166 264 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 HSPE1P61604 102 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 RPL39P5Q59GN2 51 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 BVES-AS1Q5T3Y7 98 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 OR4A47Q6IF82 309 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 ERASQ7Z444 233 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 NHLRC2Q8NBF2 726 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 FAM122AQ96E09 287 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 DCTN5Q9BTE1 182 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 C12orf49Q9H741 205 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 ZNF355PQ9NSJ1 428 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 DNAJC13O75165 2243 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 NUDT3O95989 172 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 CELA3BP08861 270 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 C1orf210Q8IVY1 113 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 TMEM105Q8N8V8 129 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 ST6GALNAC6Q969X2 333 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 PLPPR2Q96GM1 343 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 GRAMD2BQ96HH9 432 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 JPT1Q9UK76 154 aa15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 FOXA2Q9Y261 457 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-207ENST00000538548 FAM162BQ5T6X4 162 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 C12orf54Q6X4T0 127 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 FAM90A1Q86YD7 464 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 NUDT10Q8NFP7 164 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 TMEM14BQ9NUH8 114 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 DOCK10Q96BY6 2186 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 OR4S2Q8NH73 311 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 CLEC5AQ9NY25 188 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 TP73-AS1Q9UF72 201 aa15.23■□□□□ 0.03
SFSWAP-207ENST00000538548 FRYQ5TBA9 3013 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 CNOT1A5YKK6 2376 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 OR2T8A6NH00 312 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 J3QR06 171 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 SLC25A34Q6PIV7 304 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 DUSP13Q9UII6 198 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 ZFHX4Q86UP3 3567 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 URB1O60287 2271 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 MAGEA5P43359 124 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 GPR6P46095 362 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 REG1BP48304 166 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 SMIM21Q3B7S5 101 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 FAM120AOSQ5T036 256 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 WDR82Q6UXN9 313 aa15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 SNRNP40Q96DI7 357 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 RIF1Q5UIP0 2472 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-207ENST00000538548 C8orf88P0DMB2 117 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 ATP5L2Q7Z4Y8 100 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 OR2T6Q8NHC8 308 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 DDB2Q92466 427 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 SLC25A33Q9BSK2 321 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 SSBP4Q9BWG4 385 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 CSTL1Q9H114 145 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 EDDM3AQ14507 147 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 URB1-AS1Q96HZ7 61 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 CHRDL1Q9BU40 450 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 IFI27L2Q9H2X8 130 aa15.21■□□□□ 0.03
SFSWAP-207ENST00000538548 IGKV1OR2-108A0A075B7D4 117 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 AMMECR1LQ6DCA0 310 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 NUDT11Q96G61 164 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 MUC21A0A0G2JKD1 596 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 MUC21A0A140T8X8 626 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 SYS1-DBNDD2H3BUS1 97 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 K7ERU9 68 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 GATA2P23769 480 aaPredicted RBP15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 MUC21Q5SSG8 566 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 ASPHD1Q5U4P2 390 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 LINC00479Q96M42 142 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 CXXC4Q9H2H0 198 aa15.2■□□□□ 0.02
SFSWAP-207ENST00000538548 MPV17P39210 176 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 CAMPP49913 170 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 C3AR1Q16581 482 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 PRR27Q6MZM9 219 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 VWA1Q6PCB0 445 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 KLF14Q8TD94 323 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 HIGD1CA8MV81 97 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 ZNF134P52741 427 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 BPIFB3P59826 476 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 ZPBPQ9BS86 351 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 MRPL32Q9BYC8 188 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 TTTY12Q9BZ98 90 aa15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 AMMECR1Q9Y4X0 333 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-207ENST00000538548 SPTBN2O15020 2390 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 A0A1B0GXF2 115 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 HLA-DRB1P01911 266 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 UBE2L3P68036 154 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 HINT2Q9BX68 163 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 HES7Q9BYE0 225 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 hDV102S1A0JD36 115 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 HSBP1L1C9JCN9 74 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 CD5LO43866 347 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 HIST1H1EP10412 219 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 FAM71F2Q6NXP2 309 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms