RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 GNB3P16520 340 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CCL3L1P16619 93 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 IER3P46695 156 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CLDN12P56749 244 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 MMDQ15546 238 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 C17orf58Q2M2W7 97 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 FAM27D1Q5T7N8 215 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CST9LP1Q5W188 147 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 LAX1Q8IWV1 398 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF738Q8NE65 137 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR4A16Q8NH70 328 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 RNASEH2CQ8TDP1 164 aaKnown RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 RTN4IP1Q8WWV3 396 aaPredicted RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM190Q8WZ59 177 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 GPR146Q96CH1 333 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 USMG5Q96IX5 58 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 HIST1H2BLQ99880 126 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 GTSF1LQ9H1H1 148 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM231Q9H6L2 316 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 RNF167Q9H6Y7 350 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ARID1AO14497 2285 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CADP27708 2225 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 HELZ2Q9BYK8 2649 aaKnown RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 HIVEP2P31629 2446 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 A0A0D9SG52 128 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 KIR2DL5BA0A0G2JN68 375 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 KIR2DL5BA0A0G2JPC4 375 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 A6NDX4 124 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 NCBP2LA6PVI3 153 aaKnown RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 FAM90A26D6RGX4 464 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 H3BUX3 64 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CDS2O95674 445 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CD74P04233 296 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR5G3P0C626 314 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 PSG1P11464 419 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 F2RP25116 425 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 PAX9P55771 341 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR10A3P58181 314 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 DEFB112Q30KQ8 113 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF585BQ52M93 769 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR10K2Q6IF99 312 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ACSM6Q6P461 480 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 Q6ZVH6 145 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ZNF695Q8IW36 515 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 KIR2DL5AQ8N109 375 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 STPG4Q8N801 248 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 SLC35G3Q8N808 338 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 NECAP1Q8NC96 275 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR52L2PQ8NGH6 319 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR1L8Q8NGR8 309 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR5B3Q8NH48 314 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR1L1Q8NH94 360 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 RFESDQ8TAC1 157 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 SECTM1Q8WVN6 248 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ISOC2Q96AB3 205 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 SSBP4Q9BWG4 385 aaPredicted RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR2D2Q9H210 308 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 KCNIP2Q9NS61 270 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 COX11Q9Y6N1 276 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 AKAP13Q12802 2813 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CDH23Q9H251 3354 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 SLC25A6P12236 298 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ELK1P19419 428 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TMEM50BP56557 158 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TIRAPP58753 221 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 PLP1P60201 277 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 SRSF2Q01130 221 aaKnown RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 FOXE3Q13461 319 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 POU2AF1Q16633 256 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 LTC4SQ16873 150 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 PRSS54Q6PEW0 395 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 H2BFWTQ7Z2G1 175 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 CENPVQ7Z7K6 275 aaPredicted RBP2.89□□□□□ -1.95
PTPN22-211ENST00000538253 NPBQ8NG41 125 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 OR5AN1Q8NGI8 311 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 ORAI1Q96D31 301 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 MRAP2Q96G30 205 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 SIGMAR1Q99720 223 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 NABP2Q9BQ15 211 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 MAP1LC3CQ9BXW4 147 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TUBA4BQ9H853 241 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 BET1LQ9NYM9 111 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 TMED3Q9Y3Q3 217 aa2.89□□□□□ -1.95
PTPN22-211ENST00000538253 PRRC2AP48634 2157 aaKnown RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 TANC2Q9HCD6 1990 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 A0A1B0GU03 582 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 IGSF23A1L1A6 192 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 C7orf66A4D0T2 115 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 DNAJC9-AS1A6NH13 148 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 FAM223BA6NKX1 122 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 RRHO14718 337 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 LYRM1O43325 122 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 NFYAP23511 347 aaPredicted RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 PPP1CCP36873 323 aaKnown RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 SRSF3P84103 164 aaKnown RBP2.88□□□□□ -1.95
PTPN22-211ENST00000538253 GSG1LQ6UXU4 331 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 NDUFA11Q86Y39 141 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 FAM223AQ8IWN6 122 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 GBGT1Q8N5D6 347 aa2.88□□□□□ -1.95
PTPN22-211ENST00000538253 FAM24BQ8N5W8 94 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms