RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PHOX2AO14813 284 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 RBFOX2O43251 390 aaKnown RBP eCLIP7.08□□□□□ -1.28
UBE3B-208ENST00000538070 FCN3O75636 299 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 PYYP10082 97 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 LEMD1Q68G75 181 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 KCNIP4Q6PIL6 250 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 MUC15Q8N387 334 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 TMEM14BQ9NUH8 114 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 IGKV1OR2-108A0A075B7D4 117 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 CXorf65A6NEN9 183 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 CNIH1O95406 144 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 LINC00869P0C866 280 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 RND2P52198 227 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 PQLC2Q6ZP29 291 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 LINC01551Q86U37 167 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF439Q8NDP4 499 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 OR1L8Q8NGR8 309 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 PACRGQ96M98 296 aaPredicted RBP7.08□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF430Q9H8G1 570 aaPredicted RBP7.08□□□□□ -1.28
UBE3B-208ENST00000538070 TRAPPC1Q9Y5R8 145 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
UBE3B-208ENST00000538070 COX7A2P2O60397 106 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 CD33P20138 364 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 UBE2L3P68036 154 aaKnown RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 LY6DQ14210 128 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 HLA-DRB5Q30154 266 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 Q8N7P7 452 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 OR1B1Q8NGR6 318 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 YPEL4Q96NS1 127 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 TCEAL7Q9BRU2 100 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 ELOVL5Q9NYP7 299 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 SSUH2Q9Y2M2 353 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 INSIG2Q9Y5U4 225 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 H0YJW9 148 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 STAG3L2P0CL84 134 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 STAG3L3P0CL85 134 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 NBL1P41271 181 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 BPIFB3P59826 476 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 RANP62826 216 aaKnown RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 PMS2P11Q13670 270 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 KIAA1644Q3SXP7 199 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 MORN5Q5VZ52 161 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 FAM222BQ8WU58 562 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 FAM103A1Q9BTL3 118 aaKnown RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 RNASE7Q9H1E1 156 aaKnown RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 FOXA2Q9Y261 457 aaPredicted RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 PDE6DO43924 150 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 MPDU1O75352 247 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 CA1P00915 261 aaPredicted RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 CBLN1P23435 193 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 PRCDQ00LT1 54 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 CDSNQ15517 529 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 SP5Q6BEB4 398 aaPredicted RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 OR5AU1Q8NGC0 362 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 OR10G8Q8NGN5 311 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 C1orf159Q96HA4 380 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 SSBP3Q9BWW4 388 aaPredicted RBP7.07□□□□□ -1.28
UBE3B-208ENST00000538070 CTDSP1Q9GZU7 261 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 FBXL15Q9H469 300 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 CSPG4Q6UVK1 2322 aa7.07□□□□□ -1.28
UBE3B-208ENST00000538070 POLQO75417 2590 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 SHISA9B4DS77 424 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 SEC14L6B5MCN3 397 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 PNKDQ8N490 385 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 NUP37Q8NFH4 326 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 HELTA6NFD8 242 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 PFN1P07737 140 aaKnown RBP7.06□□□□□ -1.28
UBE3B-208ENST00000538070 FRMD6-AS1P0C7T7 363 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 AREGP15514 252 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 IL3RAP26951 378 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 LOXP28300 417 aaPredicted RBP7.06□□□□□ -1.28
UBE3B-208ENST00000538070 IER3P46695 156 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 GNG4P50150 75 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 MRPL54Q6P161 138 aaKnown RBP7.06□□□□□ -1.28
UBE3B-208ENST00000538070 CENPVQ7Z7K6 275 aaPredicted RBP7.06□□□□□ -1.28
UBE3B-208ENST00000538070 OR4C13Q8NGP0 309 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 OR52E5Q8NH55 327 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 RPEQ96AT9 228 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 SFRP2Q96HF1 295 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 APOBEC3AP31941 199 aaPredicted RBP7.06□□□□□ -1.28
UBE3B-208ENST00000538070 WT1-ASQ06250 92 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 VMA21Q3ZAQ7 101 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 HIST3H2BBQ8N257 126 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 PARD6GQ9BYG4 376 aaPredicted RBP7.06□□□□□ -1.28
UBE3B-208ENST00000538070 LPAR2Q9HBW0 351 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 KCNIP2Q9NS61 270 aa7.06□□□□□ -1.28
UBE3B-208ENST00000538070 USP9YO00507 2555 aaPredicted RBP7.05□□□□□ -1.28
UBE3B-208ENST00000538070 PPIAL4CA0A0B4J2A2 164 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 K7ENP7 123 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 RBP4P02753 201 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 PPIAL4GP0DN37 164 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 RNASE2P10153 161 aaKnown RBP7.05□□□□□ -1.28
UBE3B-208ENST00000538070 KLRD1Q13241 179 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 VWC2Q2TAL6 325 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 CENPWQ5EE01 88 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms