RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 DNAH2Q9P225 4427 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 IGHV3OR16-8A0A075B7F1 116 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 A8MWP6 167 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 TGOLN2O43493 480 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 MT-CO2P00403 227 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 CCR6P51684 374 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 AKR1C2P52895 323 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 ANKRD55Q3KP44 614 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 FAM209BQ5JX69 171 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 TMEM268Q5VZI3 342 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 SLC35G3Q8N808 338 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 RBPMSQ93062 196 aaKnown RBP6.32□□□□□ -1.4
SPARC-208ENST00000538026 WDR89Q96FK6 387 aaPredicted RBP6.32□□□□□ -1.4
SPARC-208ENST00000538026 C21orf62Q9NYP8 219 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 ZMAT5Q9UDW3 170 aaKnown RBP6.32□□□□□ -1.4
SPARC-208ENST00000538026 CACNG5Q9UF02 275 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 C14orf166Q9Y224 244 aaKnown RBP6.32□□□□□ -1.4
SPARC-208ENST00000538026 AGRNO00468 2067 aa6.32□□□□□ -1.4
SPARC-208ENST00000538026 ZNF320A2RRD8 509 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 A6NHS1 94 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 PLA2G10O15496 165 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 B3GALNT1O75752 331 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 CD7P09564 240 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 FRMD6-AS1P0C7T7 363 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 IGHV4-30-4P0DP06 118 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 AKR1C4P17516 323 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 FCGR2BP31994 310 aaPredicted RBP6.31□□□□□ -1.4
SPARC-208ENST00000538026 S100A5P33763 92 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 CD69Q07108 199 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 TATDN3Q17R31 274 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 PLET1Q6UQ28 207 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 LINC00322Q6ZN03 302 aaPredicted RBP6.31□□□□□ -1.4
SPARC-208ENST00000538026 TOMM5Q8N4H5 51 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 UXS1Q8NBZ7 420 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 OR52E5Q8NH55 327 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 TMEM190Q8WZ59 177 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 WFDC10AQ9H1F0 79 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 PLEKHA3Q9HB20 300 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 SCP2D1Q9UJQ7 156 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 FLVCR2Q9UPI3 526 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 SMAD5-AS1Q9Y6J3 95 aa6.31□□□□□ -1.4
SPARC-208ENST00000538026 A8MZ25 164 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 ZNF207O43670 478 aaKnown RBP6.3□□□□□ -1.4
SPARC-208ENST00000538026 PITX3O75364 302 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 NXPH3O95157 252 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 IFNA17P01571 189 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 SPCS3P61009 180 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 ERHP84090 104 aaKnown RBP6.3□□□□□ -1.4
SPARC-208ENST00000538026 PPP1R1AQ13522 171 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 FAM106AQ4KMX7 169 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 SPANXN2Q5MJ10 180 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 SGPP2Q8IWX5 399 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 TMEM61Q8N0U2 210 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 LILRB2Q8N423 598 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 IL22RA2Q969J5 263 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 RRNAD1Q96FB5 475 aaKnown RBP6.3□□□□□ -1.4
SPARC-208ENST00000538026 BSCL2Q96G97 398 aaPredicted RBP6.3□□□□□ -1.4
SPARC-208ENST00000538026 ATP6V0BQ99437 205 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.3□□□□□ -1.4
SPARC-208ENST00000538026 THYN1Q9P016 225 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 PEMTQ9UBM1 199 aa6.3□□□□□ -1.4
SPARC-208ENST00000538026 A0A0B4J2A0 478 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 A0A1B0GU03 582 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 LINC00854A0A1B0GVQ3 168 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
SPARC-208ENST00000538026 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
SPARC-208ENST00000538026 TMEM50AO95807 157 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 APOHP02749 345 aaPredicted RBP6.29□□□□□ -1.4
SPARC-208ENST00000538026 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
SPARC-208ENST00000538026 IL7P13232 177 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 MFAP4P55083 255 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 ELLP55199 621 aaPredicted RBP6.29□□□□□ -1.4
SPARC-208ENST00000538026 SPSB3Q6PJ21 355 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 BTNL8Q6UX41 500 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 TMED4Q7Z7H5 227 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 FAM219AQ8IW50 185 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 LRTM2Q8N967 370 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 UBAC2Q8NBM4 344 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 OR1L6Q8NGR2 347 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 PINX1Q96BK5 328 aaKnown RBP6.29□□□□□ -1.4
SPARC-208ENST00000538026 ZFAND3Q9H8U3 227 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 NDUFA13Q9P0J0 144 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 SHPKQ9UHJ6 478 aa6.29□□□□□ -1.4
SPARC-208ENST00000538026 FRAS1Q86XX4 4008 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 IGHV3-49A0A0A0MS15 119 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 MPTX1A8MV57 137 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 K7EMT4 169 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 NDUFA4O00483 81 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 ATG12O94817 140 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 SCAF4O95104 1147 aaKnown RBP6.28□□□□□ -1.4
SPARC-208ENST00000538026 NDUFB6O95139 128 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 SFT2D2O95562 160 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 IGKV1-17P01599 117 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 NHLRC4P0CG21 123 aaPredicted RBP6.28□□□□□ -1.4
SPARC-208ENST00000538026 SULT1A3P0DMM9 295 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 SULT1A4P0DMN0 295 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 AP3S2P59780 193 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 TNFRSF9Q07011 255 aa6.28□□□□□ -1.4
SPARC-208ENST00000538026 CNPY1Q3B7I2 92 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms