RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 K7EP34 96 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 IGFBP2P18065 325 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 SLC25A53Q5H9E4 307 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM42Q69YG0 159 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 C6orf15Q6UXA7 325 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-213ENST00000537002 LCNL1Q6ZST4 164 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 FAM231DQ6ZW35 169 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 TTC9CQ8N5M4 171 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 BEX4Q9NWD9 120 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM160Q9NX00 188 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 CNTRLQ7Z7A1 2325 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 GON4LQ3T8J9 2241 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 G3V4G9 280 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 AGFG2O95081 481 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 ACP1P24666 158 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 DLX1P56177 255 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 SAMD5Q5TGI4 173 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 PRSS57Q6UWY2 283 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 A0A0G2JMM0 328 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 A0A1W2PPB8 328 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 KIR3DP1A8MWS1 328 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 TGFBR3LH3BV60 316 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 APOMO95445 188 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 LINC00271P0C7V0 271 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 RAC3P60763 192 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 LYZL4Q96KX0 146 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 GATA2P23769 480 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-213ENST00000537002 HOXA4Q00056 320 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-213ENST00000537002 FOXL2NBQ6ZUU3 175 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 HARBI1Q96MB7 349 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 GP6Q9HCN6 339 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 C17orf98A8MV24 154 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 MRAP2Q96G30 205 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 RASL11BQ9BPW5 248 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 RPP25Q9BUL9 199 aaKnown RBP4.52□□□□□ -1.69
PTPRD-213ENST00000537002 MCRIP2Q9BUT9 160 aaKnown RBP4.52□□□□□ -1.69
PTPRD-213ENST00000537002 WDR83OSQ9Y284 106 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 FAM231BA6NCW3 169 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 GNG5P63218 68 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 CT83Q5H943 113 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM92Q6UXU6 159 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 TCF19Q9Y242 345 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 RALGAPA1Q6GYQ0 2036 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 A0A0J9YW62 118 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 C2orf83Q53S99 150 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PCSK4Q6UW60 755 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF826PQ6ZT77 177 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 MOGAT3Q86VF5 341 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM178AQ8NBL3 297 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 VSTM2AQ8TAG5 236 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 MAP1LC3AQ9H492 121 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 RPP21Q9H633 154 aaKnown RBP4.51□□□□□ -1.69
PTPRD-213ENST00000537002 IGLV3-32A0A0A0MS00 114 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PRSS47A8MTI9 375 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 GOSR1O95249 250 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 IGKV3-11P04433 115 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PAX9P55771 341 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 CD300EQ496F6 205 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-213ENST00000537002 TIMM23BQ5SRD1 257 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 BVES-AS1Q5T3Y7 98 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 FOXC2Q99958 501 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PPIAL4CA0A0B4J2A2 164 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 A0A1W2PS18 150 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 HIGD1CA8MV81 97 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 IGLC1P0CG04 106 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PPIAL4GP0DN37 164 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 MC5RP33032 325 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PSG9Q00887 426 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 SRSF6Q13247 344 aaKnown RBP4.51□□□□□ -1.69
PTPRD-213ENST00000537002 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 LEAP2Q969E1 77 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 FSCN3Q9NQT6 498 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 A0A1W2PRE2 83 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 C9orf118A6NHY6 69 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 K7EQS6 105 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 NDUFB3O43676 98 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF726P1Q15940 193 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 SPATA31B1PQ5VZV4 182 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 LHFPL4Q7Z7J7 247 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 C10orf126Q8N4M7 172 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 TEX29Q8N6K0 151 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 OR52E5Q8NH55 327 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PSMB11A5LHX3 300 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 IGHV3-48P01763 117 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 LIFP15018 202 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 SPATA12Q7Z6I5 190 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 CRIPAKQ8N1N5 446 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 SNRNP200O75643 2136 aaKnown RBP4.51□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM50AO95807 157 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 CCL11P51671 97 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 FLVCR1-AS1Q8TAF5 88 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 FER1L6-AS2Q96M78 137 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 SIGLEC8Q9NYZ4 499 aa4.51□□□□□ -1.69
PTPRD-213ENST00000537002 PEX7O00628 323 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 MOSP00540 346 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 COX7A1P24310 79 aa4.5□□□□□ -1.69
PTPRD-213ENST00000537002 RPL30P62888 115 aaKnown RBP4.5□□□□□ -1.69
PTPRD-213ENST00000537002 CACNG7P62955 275 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms