RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SPCS3P61009 180 aa13.65□□□□□ -0.22
TNFRSF1A-209ENST00000536717 OR10W1Q8NGF6 305 aa13.65□□□□□ -0.22
TNFRSF1A-209ENST00000536717 OR4C12Q96R67 309 aa13.65□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ENY2Q9NPA8 101 aa13.65□□□□□ -0.22
TNFRSF1A-209ENST00000536717 IGLC7A0M8Q6 106 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 C7orf66A4D0T2 115 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 OR2J3O76001 311 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 AREGP15514 252 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 HAPLN4Q86UW8 402 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 MPTX1A8MV57 137 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 FAM25EA8MYX2 175 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 SSNA1O43805 119 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 PITX3O75364 302 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 NXPH3O95157 252 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CRYGCP07315 174 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 OR13C7P0DN81 318 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 PSMB6P28072 239 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 SYNJ2BPP57105 145 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 ERHP84090 104 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 ATP5G2Q06055 141 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 SPINK9Q5DT21 86 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 IL34Q6ZMJ4 242 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 NECAP1Q8NC96 275 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 OR9G4Q8NGQ1 327 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 FANCD2OSQ96PS1 177 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 ELOVL1Q9BW60 279 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 ALG5Q9Y673 324 aa13.64□□□□□ -0.23
TNFRSF1A-209ENST00000536717 C5orf51A6NDU8 294 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CEBPZOSA8MTT3 80 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 BMPR1BO00238 502 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CCSO14618 274 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 IGLV1-51P01701 117 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 REG1AP05451 166 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 DEFA4P12838 97 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 GP9P14770 177 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CTRB1P17538 263 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 WT1-ASQ06250 92 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 TNFRSF9Q07011 255 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 RPEL1Q2QD12 228 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 IAH1Q2TAA2 248 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 C15orf32Q32M92 178 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CTRB2Q6GPI1 263 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 HSPB7Q9UBY9 170 aa13.63□□□□□ -0.23
TNFRSF1A-209ENST00000536717 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-209ENST00000536717 FAM90A26D6RGX4 464 aa13.62□□□□□ -0.23
TNFRSF1A-209ENST00000536717 KLK9Q2XQG4 91 aa13.62□□□□□ -0.23
TNFRSF1A-209ENST00000536717 GSG1LQ6UXU4 331 aa13.62□□□□□ -0.23
TNFRSF1A-209ENST00000536717 OR10C1Q96KK4 312 aa13.62□□□□□ -0.23
TNFRSF1A-209ENST00000536717 KLK9Q9UKQ9 250 aa13.62□□□□□ -0.23
TNFRSF1A-209ENST00000536717 DMRT1Q9Y5R6 373 aa13.62□□□□□ -0.23
TNFRSF1A-209ENST00000536717 INS-IGF2F8WCM5 200 aa13.61□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CYB5BO43169 146 aa13.61□□□□□ -0.23
TNFRSF1A-209ENST00000536717 MED6O75586 246 aa13.61□□□□□ -0.23
TNFRSF1A-209ENST00000536717 Q6ZNX1 250 aa13.61□□□□□ -0.23
TNFRSF1A-209ENST00000536717 GSKIPQ9P0R6 139 aa13.61□□□□□ -0.23
TNFRSF1A-209ENST00000536717 FBXL7Q9UJT9 491 aa13.61□□□□□ -0.23
TNFRSF1A-209ENST00000536717 SMAD5-AS1Q9Y6J3 95 aa13.61□□□□□ -0.23
TNFRSF1A-209ENST00000536717 GOSR2O14653 212 aa13.6□□□□□ -0.23
TNFRSF1A-209ENST00000536717 SNCAP37840 140 aa13.6□□□□□ -0.23
TNFRSF1A-209ENST00000536717 OR2C3Q8N628 320 aa13.6□□□□□ -0.23
TNFRSF1A-209ENST00000536717 ZBTB8BQ8NAP8 495 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-209ENST00000536717 HIPK2Q9H2X6 1198 aa13.6□□□□□ -0.23
TNFRSF1A-209ENST00000536717 HEYLQ9NQ87 328 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-209ENST00000536717 NDUFB8O95169 186 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CSN3P07498 182 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 NKX2-1P43699 371 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 OR4D5Q8NGN0 318 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 OR1L6Q8NGR2 347 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 C2orf50Q96LR7 162 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 CCDC140Q96MF4 163 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 RBKSQ9H477 322 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 IGLV11-55A0A075B6I3 123 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 PPP5D1E7EU14 171 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 WRBO00258 174 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 SUB1P53999 127 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 ZNF114Q8NC26 417 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 DTD1Q8TEA8 209 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 MED28Q9H204 178 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 SIGLEC8Q9NYZ4 499 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 THYN1Q9P016 225 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 F11RQ9Y624 299 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 S4R3C0 116 aa13.59□□□□□ -0.23
TNFRSF1A-209ENST00000536717 STAB2Q8WWQ8 2551 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 SYNGR2O43760 224 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 SCGB1D2O95969 90 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 IGHV3-23P01764 117 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 ID3Q02535 119 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 OR1P1Q8NH06 330 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 MAGT1Q9H0U3 335 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 MGAT4CQ9UBM8 478 aa13.58□□□□□ -0.24
TNFRSF1A-209ENST00000536717 A0A1B0GVG6 124 aa13.57□□□□□ -0.24
TNFRSF1A-209ENST00000536717 NHLRC4P0CG21 123 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-209ENST00000536717 HTR2BP41595 481 aa13.57□□□□□ -0.24
TNFRSF1A-209ENST00000536717 SLC25A24Q6NUK1 477 aa13.57□□□□□ -0.24
TNFRSF1A-209ENST00000536717 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-209ENST00000536717 ASCL2Q99929 193 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms