RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 MISP3Q96FF7 219 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 CXorf58Q96LI9 332 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ZC4H2Q9NQZ6 224 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 THYN1Q9P016 225 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 HSPB7Q9UBY9 170 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 FAM240BA0A1B0GVZ2 78 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR2C1O95371 312 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MT-CO2P00403 227 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 IGHV3-48P01763 117 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 HOXB5P09067 269 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 GPR183P32249 361 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ARL3P36405 182 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 RPEL1Q2QD12 228 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 C9orf66Q5T8R8 295 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR1L6Q8NGR2 347 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 TMEM170AQ8WVE7 144 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ZNF414Q96IQ9 312 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SEC22CQ9BRL7 303 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 C21orf62Q9NYP8 219 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 TMED3Q9Y3Q3 217 aa8.64□□□□□ -1.03
TNFRSF1A-208ENST00000536194 NOTCH1P46531 2555 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CEBPZOSA8MTT3 80 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CYB5BO43169 146 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 GGCTO75223 188 aaKnown RBP8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CLEC3BP05452 202 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 H2AFB2P0C5Z0 115 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SLC25A6P12236 298 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 EDN2P20800 178 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SNCAP37840 140 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 FAM209BQ5JX69 171 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MZT2BQ6NZ67 158 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 NRARPQ7Z6K4 114 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR9G4Q8NGQ1 327 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR1S1Q8NH92 325 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MITD1Q8WV92 249 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 PINX1Q96BK5 328 aaKnown RBP8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 RBKSQ9H477 322 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 FNDC4Q9H6D8 234 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ENY2Q9NPA8 101 aa8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 AURKAIP1Q9NWT8 199 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF1A-208ENST00000536194 PIGBOS1A0A0B4J2F0 54 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 IGHV3-35A0A0C4DH35 117 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR2T8A6NH00 312 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SAP30O75446 220 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CSN3P07498 182 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ADMP35318 185 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MLANAQ16655 118 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 HAPLN4Q86UW8 402 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SLC24A4Q8NFF2 622 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 COQ8AQ8NI60 647 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 DTD1Q8TEA8 209 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CHRDL1Q9BU40 450 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 GPR61Q9BZJ8 451 aa8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 HEYLQ9NQ87 328 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MRPL36Q9P0J6 103 aaKnown RBP8.62□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MEGF8Q7Z7M0 2845 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 TGOLN2O43493 480 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 HTR2BP41595 481 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 INSL3P51460 131 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 C2orf83Q53S99 150 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 PLET1Q6UQ28 207 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 UNQ9165/PRO28630Q6UXU0 137 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 REC114Q7Z4M0 266 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 DUSP18Q8NEJ0 188 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR4D5Q8NGN0 318 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ENKURQ8TC29 256 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ZNF431Q8TF32 576 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 BSCL2Q96G97 398 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR10C1Q96KK4 312 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ATP6V0BQ99437 205 aa8.61□□□□□ -1.03
TNFRSF1A-208ENST00000536194 WI2-2373I1.2A0A1W2PRP0 233 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 TMEM213A2RRL7 107 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 FAM90A26D6RGX4 464 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 LGALS9O00182 355 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CCSO14618 274 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CTSGP08311 255 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 NPY1RP25929 384 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 FCGR2BP31994 310 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SUB1P53999 127 aaKnown RBP eCLIP8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MFAP4P55083 255 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 Q56UQ5 140 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 UBAC2Q8NBM4 344 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OR4C12Q96R67 309 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 MAGT1Q9H0U3 335 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 HIPK2Q9H2X6 1198 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CACFD1Q9UGQ2 172 aa8.6□□□□□ -1.03
TNFRSF1A-208ENST00000536194 C2orf70A6NJV1 201 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 C15orf62A8K5M9 175 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 A8MWP6 167 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 K7EIL1 84 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 CORTO00230 105 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 IGLV1-51P01701 117 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 IL5P05113 134 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 IAPPP10997 89 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 SPNP16150 400 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 OPRK1P41145 380 aa8.59□□□□□ -1.03
TNFRSF1A-208ENST00000536194 ID3Q02535 119 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms