RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 I3L2K1 104 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 M0QYG6 137 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 TSPAN4O14817 238 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 B3GALNT1O75752 331 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 CTSGP08311 255 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 MRPS10P82664 201 aaKnown RBP8.07□□□□□ -1.12
CCDC60-202ENST00000535685 BTNL8Q6UX41 500 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 TMEM229BQ8NBD8 167 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 OR4A16Q8NH70 328 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 TERB2Q8NHR7 220 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 ABHD1Q96SE0 405 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 SPAG8Q99932 426 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-202ENST00000535685 BCL7BQ9BQE9 202 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 HINT2Q9BX68 163 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 RABL2AQ9UBK7 228 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-202ENST00000535685 EXTL2Q9UBQ6 330 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 RABL2BQ9UNT1 228 aa8.07□□□□□ -1.12
CCDC60-202ENST00000535685 OR2T8A6NH00 312 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 GABARAPH6UMI1 98 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 ATG12O94817 140 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 CD3DP04234 171 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 PIGPP57054 158 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 TAS2R19P59542 299 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 PVRIGQ6DKI7 326 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 GPR141Q7Z602 305 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 OR52B4Q8NGK2 314 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 IL17DQ8TAD2 202 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 ZFAND1Q8TCF1 268 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 MRGPRFQ96AM1 343 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 ZNF414Q96IQ9 312 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 OR10C1Q96KK4 312 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 CHRDL1Q9BU40 450 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 MIXL1Q9H2W2 232 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 LYSTQ99698 3801 aa8.06□□□□□ -1.12
CCDC60-202ENST00000535685 CTDSPLO15194 276 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 SCAF4O95104 1147 aaKnown RBP8.05□□□□□ -1.12
CCDC60-202ENST00000535685 IGKV1-5P01602 117 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 PGAM2P15259 253 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 UCP1P25874 307 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 MFAP4P55083 255 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 ERHP84090 104 aaKnown RBP8.05□□□□□ -1.12
CCDC60-202ENST00000535685 RELQ04864 619 aaPredicted RBP8.05□□□□□ -1.12
CCDC60-202ENST00000535685 AARDQ4LEZ3 155 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 LAMTOR1Q6IAA8 161 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 RBPMS2Q6ZRY4 209 aaKnown RBP8.05□□□□□ -1.12
CCDC60-202ENST00000535685 CCDC71LQ8N9Z2 235 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 TP53RKQ96S44 253 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 WFDC10AQ9H1F0 79 aa8.05□□□□□ -1.12
CCDC60-202ENST00000535685 LOC102724200A0A096LPH7 203 aaPredicted RBP8.04□□□□□ -1.12
CCDC60-202ENST00000535685 A0A0B4J293 547 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 IGHV3-35A0A0C4DH35 117 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 LCE6AA0A183 80 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 C3orf85A0A1B0GTC6 90 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 NUPL2O15504 423 aaKnown RBP8.04□□□□□ -1.12
CCDC60-202ENST00000535685 RAB3DO95716 219 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 CTSDP07339 412 aaPredicted RBP8.04□□□□□ -1.12
CCDC60-202ENST00000535685 MEF2DQ14814 521 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 SURF2Q15527 256 aaPredicted RBP8.04□□□□□ -1.12
CCDC60-202ENST00000535685 STEAP1BQ6NZ63 245 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 OR4D10Q8NGI6 311 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 RAB2BQ8WUD1 216 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 SMIM4Q8WVI0 70 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 C16orf92Q96LL3 132 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 GGTLC1Q9BX51 225 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 NXF2Q9GZY0 626 aaKnown RBP8.04□□□□□ -1.12
CCDC60-202ENST00000535685 SMPXQ9UHP9 88 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 RYR2Q92736 4967 aa8.04□□□□□ -1.12
CCDC60-202ENST00000535685 CTDSP2O14595 271 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 CDS2O95674 445 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 MT-CO2P00403 227 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 PI3P19957 117 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 TMBIM6P55061 237 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 SPCS2Q15005 226 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 Q56UQ5 140 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 FAM219AQ8IW50 185 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 OR13C8Q8NGS7 320 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 RETNQ9HD89 108 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 CCDC59Q9P031 241 aaKnown RBP8.03□□□□□ -1.12
CCDC60-202ENST00000535685 COPZ2Q9P299 210 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 TP53TG1Q9Y2A0 90 aa8.03□□□□□ -1.12
CCDC60-202ENST00000535685 IGHV3-21A0A0B4J1V1 117 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 KIR2DL5BA0A0G2JN68 375 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 KIR2DL5BA0A0G2JPC4 375 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 IGHV7-4-1A0A0J9YVY3 117 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 OR4C46A6NHA9 309 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 CORTO00230 105 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 UBE2CO00762 179 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 CHEK1O14757 476 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 ST8SIA3O43173 380 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 CD5P06127 495 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 RPL5P46777 297 aaKnown RBP8.02□□□□□ -1.13
CCDC60-202ENST00000535685 NPBWR1P48145 328 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 AKR1C2P52895 323 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 SUB1P53999 127 aaKnown RBP eCLIP8.02□□□□□ -1.13
CCDC60-202ENST00000535685 CMC4P56277 68 aaPredicted RBP8.02□□□□□ -1.13
CCDC60-202ENST00000535685 BSXQ3C1V8 233 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 RNASE12Q5GAN4 147 aaKnown RBP8.02□□□□□ -1.13
CCDC60-202ENST00000535685 Q6ZWC4 215 aa8.02□□□□□ -1.13
CCDC60-202ENST00000535685 KIR2DL5AQ8N109 375 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms