RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 C20orf144Q9BQM9 153 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 DCAF16Q9NXF7 216 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 CHEK1O14757 476 aa13.1□□□□□ -0.31
MCF2L-232ENST00000535094 SH2D7A6NKC9 451 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-232ENST00000535094 PRB3Q04118 309 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-232ENST00000535094 MZT1Q08AG7 82 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 HCP5Q6MZN7 132 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 WISP2O76076 250 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 RAB1CQ92928 201 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 A0A1B0GWJ7 208 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 A0A1W2PRD5 423 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 A0A1W2PRF3 423 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 A0A1W2PRM7 423 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 C8orf88P0DMB2 117 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 S100A7P31151 101 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 CCL8P80075 99 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 DUX4L9Q6RFH8 374 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-232ENST00000535094 SSX8Q7RTT4 187 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 OR10X1Q8NGY0 326 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 FAM168AQ92567 244 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 NPIPB3Q92617 1050 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 PAXXQ9BUH6 204 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 PROCRQ9UNN8 238 aa13.09□□□□□ -0.31
MCF2L-232ENST00000535094 KIAA1549Q9HCM3 1950 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 TNXAQ16473 311 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 TEX43Q6ZNM6 134 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 TCF24Q7RTU0 167 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 ZNF738Q8NE65 137 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 Q8TCH9 128 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 FLYWCH2Q96CP2 140 aaKnown RBP13.08□□□□□ -0.31
MCF2L-232ENST00000535094 JPT1Q9UK76 154 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 V9GYV3 84 aa13.08□□□□□ -0.31
MCF2L-232ENST00000535094 A0A1W2PN81 502 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 NKX2-8O15522 239 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 HYPMO75409 117 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 C10orf55Q5SWW7 151 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 FAM216BQ8N7L0 139 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 ZPBPQ9BS86 351 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 CLEC7AQ9BXN2 247 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 PROP1O75360 226 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-232ENST00000535094 ZCCHC24Q8N2G6 241 aaKnown RBP13.08□□□□□ -0.32
MCF2L-232ENST00000535094 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.32
MCF2L-232ENST00000535094 ZGRF1Q86YA3 2104 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 BMPR1BO00238 502 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 MOSP00540 346 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 IGKV1-16P04430 117 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 SNRNP40Q96DI7 357 aaKnown RBP13.07□□□□□ -0.32
MCF2L-232ENST00000535094 CDX2Q99626 313 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-232ENST00000535094 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 VDAC2P45880 294 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-232ENST00000535094 C10orf113Q5VZT2 155 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 AP1S3Q96PC3 154 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 PRNDQ9UKY0 176 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 IGKV1D-17A0A075B6S4 117 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 KLF3P57682 345 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-232ENST00000535094 CX3CL1P78423 397 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 SLAQ13239 276 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 CT45A1Q5HYN5 189 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 Q6ZT83 130 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 CT45A3Q8NHU0 189 aa13.07□□□□□ -0.32
MCF2L-232ENST00000535094 PGPA6NDG6 321 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 HIGD1CA8MV81 97 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 GGTLC3B5MD39 225 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 LEMD1Q68G75 181 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 UBALD2Q8IYN6 164 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 TSKUQ8WUA8 353 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 TP73-AS1Q9UF72 201 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 SFTPCP11686 197 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 DEFB109BQ30KR1 87 aa13.06□□□□□ -0.32
MCF2L-232ENST00000535094 TNFAIP6P98066 277 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-232ENST00000535094 TMEM136Q6ZRR5 245 aa13.05□□□□□ -0.32
MCF2L-232ENST00000535094 C9orf106Q8NAJ2 232 aa13.05□□□□□ -0.32
MCF2L-232ENST00000535094 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
MCF2L-232ENST00000535094 GP6Q9HCN6 339 aa13.05□□□□□ -0.32
MCF2L-232ENST00000535094 ZNF138P52744 262 aa13.05□□□□□ -0.32
MCF2L-232ENST00000535094 PLGLAQ15195 96 aa13.05□□□□□ -0.32
MCF2L-232ENST00000535094 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
MCF2L-232ENST00000535094 IGHV2OR16-5A0A0B4J2B6 119 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 SS18L1O75177 396 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-232ENST00000535094 IGLC2P0DOY2 106 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 KIR2DS2P43631 304 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 LINC00310P59036 64 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 VWC2Q2TAL6 325 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 RAB9BQ9NP90 201 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 IDI2-AS1Q9NZ38 188 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 TRBV9A0A0B4J1U6 114 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 NUDT3O95989 172 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 P0C879 139 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 PRRX1P54821 245 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 SPRNQ5BIV9 151 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 C22orf15Q8WYQ4 148 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms