RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GLRXP35754 106 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 TCL1AP56279 114 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 SUMO1P63165 101 aaKnown RBP13.54□□□□□ -0.24
CTSB-228ENST00000533455 KIAA1644Q3SXP7 199 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 RASL11AQ6T310 242 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 SLC25A48Q6ZT89 311 aaKnown RBP13.54□□□□□ -0.24
CTSB-228ENST00000533455 WIPF2Q8TF74 440 aaPredicted RBP13.54□□□□□ -0.24
CTSB-228ENST00000533455 LOXL4Q96JB6 756 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 M0R296 226 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 GNG10P50151 68 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 FAM201AQ5SY85 155 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 NIT1Q86X76 327 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 FDCSPQ8NFU4 85 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 OR9G1Q8NH87 305 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 FAM167A-AS1Q96KT0 104 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 ZNF714Q96N38 554 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 GAFA1Q96PS6 74 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
CTSB-228ENST00000533455 IGLV3-9A0A075B6K5 115 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 SRRM4A7MD48 611 aaKnown RBP13.53□□□□□ -0.24
CTSB-228ENST00000533455 SPRY3O43610 288 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 LINC00614P0C842 121 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 SP9P0CG40 484 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 MRPL54Q6P161 138 aaKnown RBP13.53□□□□□ -0.24
CTSB-228ENST00000533455 DUX4L9Q6RFH8 374 aaPredicted RBP13.53□□□□□ -0.24
CTSB-228ENST00000533455 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 SLC25A2Q9BXI2 301 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 GCM1Q9NP62 436 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 MRPL27Q9P0M9 148 aaKnown RBP13.53□□□□□ -0.24
CTSB-228ENST00000533455 RNF7Q9UBF6 113 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 GPR179Q6PRD1 2367 aa13.53□□□□□ -0.24
CTSB-228ENST00000533455 TRAV17A0A0B4J275 112 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 TM4SF5O14894 197 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 IGKV1-16P04430 117 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 MGST1P10620 155 aaKnown RBP13.52□□□□□ -0.24
CTSB-228ENST00000533455 PMCHP20382 165 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 CCL11P51671 97 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 PRRX1P54821 245 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 SLC35B1P78383 322 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 C3orf36Q3SXR2 165 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 SPATA45Q537H7 98 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 C19orf35Q6ZS72 473 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 FAM231DQ6ZW35 169 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 MBD6Q96DN6 1003 aa13.52□□□□□ -0.24
CTSB-228ENST00000533455 RPUSD1Q9UJJ7 312 aaKnown RBP13.52□□□□□ -0.24
CTSB-228ENST00000533455 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.25
CTSB-228ENST00000533455 DLL1O00548 723 aa13.52□□□□□ -0.25
CTSB-228ENST00000533455 APCSP02743 223 aa13.52□□□□□ -0.25
CTSB-228ENST00000533455 SAA1P0DJI8 122 aaPredicted RBP13.52□□□□□ -0.25
CTSB-228ENST00000533455 COL5A1-AS1Q5SY13 56 aa13.52□□□□□ -0.25
CTSB-228ENST00000533455 YLPM1P49750 1951 aaKnown RBP13.52□□□□□ -0.25
CTSB-228ENST00000533455 TNCP24821 2201 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 INS-IGF2F8WCM5 200 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 M0R1B8 84 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 NPSP0C0P6 89 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 C3orf79P0CE67 100 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 USF1P22415 310 aaPredicted RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 UBE2L3P68036 154 aaKnown RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 TSKUQ8WUA8 353 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 SERTAD4Q9NUC0 356 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 UQCR10Q9UDW1 63 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 MBD3L4A6NDZ8 208 aaPredicted RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 MBD3L3A6NE82 208 aaPredicted RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 MBD3L5A6NJ08 208 aaPredicted RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 NKX2-8O15522 239 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 MLANAQ16655 118 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 TIMM23BQ5SRD1 257 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 ZNF788Q6ZQV5 615 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 ZNF833PQ6ZTB9 187 aa13.51□□□□□ -0.25
CTSB-228ENST00000533455 MBD3L2Q8NHZ7 208 aaPredicted RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 OSR1Q8TAX0 266 aaPredicted RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 ZNF331Q9NQX6 463 aaPredicted RBP13.51□□□□□ -0.25
CTSB-228ENST00000533455 IGLC2P0DOY2 106 aa13.5□□□□□ -0.25
CTSB-228ENST00000533455 IGLC3P0DOY3 106 aa13.5□□□□□ -0.25
CTSB-228ENST00000533455 SEM1Q6ZVN7 128 aa13.5□□□□□ -0.25
CTSB-228ENST00000533455 C18orf32Q8TCD1 76 aa13.5□□□□□ -0.25
CTSB-228ENST00000533455 NDUFA4L2Q9NRX3 87 aa13.5□□□□□ -0.25
CTSB-228ENST00000533455 PCNX2A6NKB5 2137 aa13.5□□□□□ -0.25
CTSB-228ENST00000533455 BATFQ16520 125 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 MORN5Q5VZ52 161 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 GRAMD2BQ96HH9 432 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 DNAJC4Q9NNZ3 241 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 TRAV5A0A0B4J249 113 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 SELENOVP59797 346 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 SLAQ13239 276 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 OR10W1Q8NGF6 305 aa13.49□□□□□ -0.25
CTSB-228ENST00000533455 HYPMO75409 117 aa13.48□□□□□ -0.25
CTSB-228ENST00000533455 KLF5Q13887 457 aaPredicted RBP13.48□□□□□ -0.25
CTSB-228ENST00000533455 VHLLQ6RSH7 139 aa13.48□□□□□ -0.25
CTSB-228ENST00000533455 ZNF329Q86UD4 541 aa13.48□□□□□ -0.25
CTSB-228ENST00000533455 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
CTSB-228ENST00000533455 OR1L4Q8NGR5 311 aa13.48□□□□□ -0.25
CTSB-228ENST00000533455 FAM168AQ92567 244 aa13.48□□□□□ -0.25
CTSB-228ENST00000533455 CCL13Q99616 98 aa13.48□□□□□ -0.25
CTSB-228ENST00000533455 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
CTSB-228ENST00000533455 CA1P00915 261 aaPredicted RBP13.47□□□□□ -0.25
CTSB-228ENST00000533455 IGHV1-46P01743 117 aa13.47□□□□□ -0.25
CTSB-228ENST00000533455 ERHP84090 104 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms